PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-LOC103949392 View in Genome Browser
Position	NW_025999501.1:13004741-13010873 (+) 6132bp
Gene Type	gene
Gene Description (Protein Product)	P5CS plays a key role in proline biosynthesis; leading to osmoregulation in plants
Organism	Pyrus x bretschneideri
Also AS	MD12G1150700AT3G55610

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-LOC103962395 Bifunctional dethiobiotin synthetase 7;8-diamino-pelargonic acid aminotransferase gene-LOC125476999 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family gene-LOC103952020 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Regulatory gene	gene-LOC103926579 transcription factor gene-LOC103926580 Developmental protein SEPALLATA gene-LOC103926659 Transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004350	glutamate-5-semialdehyde dehydrogenase activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	MF
GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	MF
GO:0055114	obsolete oxidation-reduction process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00330	Arginine and proline metabolism	-