Basic Information
Gene ID
gene-LOC103962701
Position
NW_025999424.1:4540727-4543650 (-)
2923bp
Gene Type
gene
Gene Description (Protein Product)
S-adenosylmethionine decarboxylase
Organism
Also AS MD17G1070300AT3G02470

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125479660 Belongs to the spermidine spermine synthase family
gene-LOC125478876 Belongs to the spermidine spermine synthase family
gene-LOC103965676 Catalyzes the formation of S-adenosylmethionine from methionine and ATP
Regulatory gene
gene-LOC103926731 B3 DNA binding domain
gene-LOC103927195 Dof zinc finger protein
gene-LOC103927244 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -
map00270 Cysteine and methionine metabolism Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].