PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC103962876 View in Genome Browser
Position	NW_025999501.1:4973550-4975142 (-) 1592bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peptidase A1 family
Organism	Pyrus x bretschneideri
Also AS	MD15G1383700AT1G09750

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125475982 Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall; galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

gene-LOC125475984 Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall; galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

gene-LOC125475983 Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall; galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties

Regulatory gene

gene-LOC103926579 transcription factor

gene-LOC103926580 Developmental protein SEPALLATA

gene-LOC103926939 Myb-related protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0002376	immune system process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004175	endopeptidase activity	MF
GO:0004190	aspartic-type endopeptidase activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0006508	proteolysis	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006955	immune response	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008233	peptidase activity	MF
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009505	plant-type cell wall	CC
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009627	systemic acquired resistance	BP
GO:0009814	defense response to other organism	BP
GO:0010941	regulation of cell death	BP
GO:0016787	hydrolase activity	MF
GO:0019538	protein metabolic process	BP
GO:0030163	protein catabolic process	BP
GO:0030312	external encapsulating structure	CC
GO:0043067	regulation of programmed cell death	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0044238	primary metabolic process	BP
GO:0044464	obsolete cell part	CC
GO:0045087	innate immune response	BP
GO:0048046	apoplast	CC
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0065007	biological regulation	BP
GO:0070001	aspartic-type peptidase activity	MF
GO:0070011	peptidase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0098542	defense response to other organism	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP