Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125470811
View in Genome Browser
Position
NW_025999791.1:414908-417640 (+)
2732bp
Gene Type
gene
Gene Description (Protein Product)
Protein TRANSPARENT TESTA
Organism
Pyrus x bretschneideri
Also AS MD12G1066400AT3G57670

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125477762 Floral homeotic protein APETALA
gene-LOC125476493 MADS-box protein
gene-LOC125477598 response regulator

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0001709 cell fate determination BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009812 flavonoid metabolic process BP
GO:0009813 flavonoid biosynthetic process BP
GO:0009826 unidimensional cell growth BP
GO:0009856 pollination BP
GO:0009860 pollen tube growth BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0009932 cell tip growth BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010468 regulation of gene expression BP
GO:0010500 transmitting tissue development BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022414 reproductive process BP
GO:0030154 cell differentiation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0040007 growth BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044706 multi-multicellular organism process BP
GO:0045165 cell fate commitment BP
GO:0048367 shoot system development BP
GO:0048438 floral whorl development BP
GO:0048467 gynoecium development BP
GO:0048468 cell development BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048868 pollen tube development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090567 reproductive shoot system development BP
GO:0140110 transcription regulator activity MF
GO:1901576 organic substance biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1990058 fruit replum development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP