Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125472005
View in Genome Browser
Position
NW_025999802.1:560985-576968 (+)
15983bp
Gene Type
gene
Gene Description (Protein Product)
Tetratricopeptide repeat
Organism
Pyrus x bretschneideri
Also AS MD13G1010600AT3G18420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125477569 zinc finger CCCH domain-containing protein
gene-LOC125472011 Catalyzes xyloglucan endohydrolysis (XEH) and or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers; an essential constituent of the primary cell wall; and thereby participates in cell wall construction of growing tissues
gene-LOC125479057 E3 ubiquitin-protein ligase RGLG2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0071840 cellular component organization or biogenesis BP