Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125474710
View in Genome Browser
Position
NW_025999424.1:6557752-6559754 (+)
2002bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ATG8 family
Organism
Pyrus x bretschneideri
Also AS MD11G1216100AT1G62040AT2G05630

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125480724 -
gene-LOC125480724 Autophagy-related protein
gene-LOC125479251 Protein present in Fab1; YOTB; Vac1; and EEA1
Regulatory gene
gene-LOC103930105 Protein BASIC PENTACYSTEINE6-like
gene-LOC103941549 Protein BASIC PENTACYSTEINE6-like
gene-LOC103942443 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006950 response to stress BP
GO:0006995 cellular response to nitrogen starvation BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0033554 cellular response to stress BP
GO:0042594 response to starvation BP
GO:0043562 cellular response to nitrogen levels BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071496 cellular response to external stimulus BP