Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125474962
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Position
NW_025999424.1:7530060-7531638 (-)
1578bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase superfamily protein
Organism
Pyrus x bretschneideri
Also AS MD17G1110900AT3G14040

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125479945 Alpha-L-arabinofuranosidase
gene-PG1 Polygalacturonase-like
gene-LOC125476956 Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall; galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties
Regulatory gene
gene-LOC103926593 Myb-related protein
gene-LOC103926634 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC103926939 Myb-related protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -