Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125477807
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Position
NW_025999524.1:4936934-4939555 (-)
2621bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Nudix hydrolase family
Organism
Pyrus x bretschneideri
Also AS MD16G1027300AT1G30110

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125480867 U6 snRNA-associated Sm-like protein
gene-LOC125479156 5'-3' exoribonuclease
gene-LOC125480813 Pre-mRNA-splicing factor ATP-dependent RNA
Regulatory gene
gene-LOC103928015 Protein tesmin TSO1-like CXC
gene-LOC103937109 Tesmin/TSO1-like CXC domain
gene-LOC103937843 Protein tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004081 bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity MF
GO:0004551 dinucleotide phosphatase activity MF
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008796 bis(5'-nucleosyl)-tetraphosphatase activity MF
GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity MF
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009166 nucleotide catabolic process BP
GO:0009987 cellular process BP
GO:0015959 diadenosine polyphosphate metabolic process BP
GO:0015961 diadenosine polyphosphate catabolic process BP
GO:0015965 diadenosine tetraphosphate metabolic process BP
GO:0015967 diadenosine tetraphosphate catabolic process BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0016794 diphosphoric monoester hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019439 aromatic compound catabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0034404 nucleobase-containing small molecule biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0034655 nucleobase-containing compound catabolic process BP
GO:0042578 phosphoric ester hydrolase activity MF
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0046434 organophosphate catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901292 nucleoside phosphate catabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP