Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125478520
View in Genome Browser
Position
NW_025999390.1:12505899-12507706 (+)
1807bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the adaptor complexes small subunit family
Organism
Pyrus x bretschneideri
Also AS MD15G1200600AT2G19790

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125479787 Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
gene-LOC125479729 Belongs to the adaptor complexes medium subunit family
gene-LOC125480192 Sorting nexin
Regulatory gene
gene-LOC103926530 NAC transcription factor
gene-LOC103927195 Dof zinc finger protein
gene-LOC103927424 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0030117 membrane coat CC
GO:0030119 AP-type membrane coat adaptor complex CC
GO:0030124 AP-4 adaptor complex CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048475 coated membrane CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098796 membrane protein complex CC