Basic Information
Gene ID
gene-LOC125480127
Position
NW_025999635.1:3485969-3488018 (+)
2049bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism
Also AS MD01G1162700AT5G05340

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125480152 Glutathione S-transferase; C-terminal domain
Regulatory gene
gene-LOC103926579 transcription factor
gene-LOC103926580 Developmental protein SEPALLATA
gene-LOC103926659 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.