PPGR - Gene Detail

Gene ID	QL04p080658.g View in Genome Browser
Position	chr4:80656288-80659187 (-) 2899bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism	Quercus lobata
Also AS	AT4G33870

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	QL09p023755.g Belongs to the oxygen-dependent FAD-linked oxidoreductase family QL06p034060.g cytochrome P450 QL09p006915.g Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Regulatory gene	QL01p032408.g Dof zinc finger protein QL01p036638.g dof zinc finger protein QL02p024902.g dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004601	peroxidase activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005911	cell-cell junction	CC
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009505	plant-type cell wall	CC
GO:0009506	plasmodesma	CC
GO:0009636	response to toxic substance	BP
GO:0009664	plant-type cell wall organization	BP
GO:0009987	cellular process	BP
GO:0016043	cellular component organization	BP
GO:0016209	antioxidant activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	MF
GO:0030054	cell junction	CC
GO:0030312	external encapsulating structure	CC
GO:0042221	response to chemical	BP
GO:0044464	obsolete cell part	CC
GO:0045229	external encapsulating structure organization	BP
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055044	symplast	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071555	cell wall organization	BP
GO:0071669	plant-type cell wall organization or biogenesis	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0097237	cellular response to toxic substance	BP
GO:0098754	detoxification	BP
GO:0098869	cellular oxidant detoxification	BP
GO:1990748	cellular detoxification	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.