PPGR - Gene Detail

Basic Information

Gene ID	QL08p063798.g View in Genome Browser
Position	chr8:63792831-63802602 (-) 9771bp
Gene Type	gene
Gene Description (Protein Product)	cytosolic
Organism	Quercus lobata
Also AS	AT5G05460

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

QL12p002179.g Belongs to the alternative oxidase family

QL93p0073_0499.g Ubiquitin-2 like Rad60 SUMO-like

QL09p007503.g Ribosomal L40e family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000270	peptidoglycan metabolic process	BP
GO:0000323	lytic vacuole	CC
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	MF
GO:0004563	beta-N-acetylhexosaminidase activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005615	extracellular space	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005764	lysosome	CC
GO:0005773	vacuole	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0006022	aminoglycan metabolic process	BP
GO:0006026	aminoglycan catabolic process	BP
GO:0006027	glycosaminoglycan catabolic process	BP
GO:0006464	protein modification process	BP
GO:0006491	N-glycan processing	BP
GO:0006517	protein deglycosylation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009100	glycoprotein metabolic process	BP
GO:0009253	peptidoglycan catabolic process	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009987	cellular process	BP
GO:0015929	hexosaminidase activity	MF
GO:0016052	carbohydrate catabolic process	BP
GO:0016231	beta-N-acetylglucosaminidase activity	MF
GO:0016787	hydrolase activity	MF
GO:0016798	hydrolase activity, acting on glycosyl bonds	MF
GO:0019538	protein metabolic process	BP
GO:0030203	glycosaminoglycan metabolic process	BP
GO:0033925	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	MF
GO:0035821	modulation of process of another organism	BP
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0044033	obsolete multi-organism metabolic process	BP
GO:0044035	obsolete multi-organism catabolic process	BP
GO:0044040	obsolete multi-organism carbohydrate metabolic process	BP
GO:0044041	obsolete multi-organism carbohydrate catabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044278	cell wall disruption in another organism	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044421	obsolete extracellular region part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0050896	response to stimulus	BP
GO:0051672	obsolete catabolism by organism of cell wall peptidoglycan in other organism	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0071704	organic substance metabolic process	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901136	carbohydrate derivative catabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP

KEGG Term	Name	Description
map00511	Other glycan degradation	-