PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	QL11p033622.g View in Genome Browser
Position	chr11:33621221-33622853 (+) 1632bp
Gene Type	gene
Gene Description (Protein Product)	Cinnamyl alcohol dehydrogenase
Organism	Quercus lobata
Also AS	AT3G19450

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	QL12p006872.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily QL11p038340.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily QL11p046036.g Cytochrome p450
Regulatory gene	QL01p009673.g AP2 ERF and B3 domain-containing transcription factor QL01p023780.g B3 domain-containing protein QL01p024575.g B3 domain-containing transcription repressor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.