Basic Information
Gene ID
Position
chr12:2359618-2365882 (-)
6264bp
Gene Type
gene
Gene Description (Protein Product)
pre-mRNA-splicing factor ISY1 homolog
Organism
Also AS AT3G18790

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
QL12p022157.g Small nuclear ribonucleoprotein
QL12p003635.g Small nuclear ribonucleoprotein
QL12p028476.g Small nuclear ribonucleoprotein
Regulatory gene
QL01p032408.g Dof zinc finger protein
QL01p036638.g dof zinc finger protein
QL02p024902.g dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.