PPGR - Gene Detail

Basic Information

Gene ID	Qrob_T0316660.2.g View in Genome Browser
Position	Qrob_Chr10:30855807-30857485 (+) 1678bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Organism	Quercus robur
Also AS	AT1G30760

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Qrob_T0573480.2.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Qrob_T0598160.2.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Qrob_T0683640.2.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009505	plant-type cell wall	CC
GO:0009506	plasmodesma	CC
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009620	response to fungus	BP
GO:0016020	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	MF
GO:0030054	cell junction	CC
GO:0030312	external encapsulating structure	CC
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048046	apoplast	CC
GO:0050832	defense response to fungus	BP
GO:0050896	response to stimulus	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0055044	symplast	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071944	cell periphery	CC
GO:0098542	defense response to other organism	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.