Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Qrob_T0467390.2.g
View in Genome Browser
Position
Qrob_Chr08:40318246-40320376 (+)
2130bp
Gene Type
gene
Gene Description (Protein Product)
CAAX protease self-immunity
Organism
Quercus robur
Also AS AT2G20725

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Qrob_T0658530.2.g Protein of unknown function (DUF1681)
Qrob_T0522800.2.g Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
Qrob_T0674370.2.g Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006897 endocytosis BP
GO:0006898 receptor-mediated endocytosis BP
GO:0008150 biological_process BP
GO:0012506 vesicle membrane CC
GO:0016020 membrane CC
GO:0016192 vesicle-mediated transport BP
GO:0030117 membrane coat CC
GO:0030118 clathrin coat CC
GO:0030120 vesicle coat CC
GO:0030125 clathrin vesicle coat CC
GO:0030135 coated vesicle CC
GO:0030136 clathrin-coated vesicle CC
GO:0030276 clathrin binding MF
GO:0030659 cytoplasmic vesicle membrane CC
GO:0030662 coated vesicle membrane CC
GO:0030665 clathrin-coated vesicle membrane CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032050 clathrin heavy chain binding MF
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048475 coated membrane CC
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0071944 cell periphery CC
GO:0072583 clathrin-dependent endocytosis BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098657 import into cell BP
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC