PPGR - Gene Detail

Gene ID	Qrob_T0493480.2.g View in Genome Browser
Position	Qrob_Chr03:8657253-8664657 (-) 7404bp
Gene Type	gene
Gene Description (Protein Product)	respiratory burst oxidase homolog protein
Organism	Quercus robur
Also AS	AT1G09090

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Qrob_T0720310.2.g Calcium-dependent protein kinase Qrob_T0683620.2.g Calcium-dependent protein kinase Qrob_T0669810.2.g Calcium-dependent protein kinase
Regulatory gene	Qrob_T0010480.2.g B3 domain-containing transcription factor Qrob_T0010490.2.g B3 domain-containing transcription factor Qrob_T0010500.2.g B3 domain-containing transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005509	calcium ion binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006950	response to stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009408	response to heat	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009791	post-embryonic development	BP
GO:0009845	seed germination	BP
GO:0016020	membrane	CC
GO:0016174	NAD(P)H oxidase H2O2-forming activity	MF
GO:0016491	oxidoreductase activity	MF
GO:0016651	oxidoreductase activity, acting on NAD(P)H	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043621	protein self-association	MF
GO:0044464	obsolete cell part	CC
GO:0046872	metal ion binding	MF
GO:0048856	anatomical structure development	BP
GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	MF
GO:0050896	response to stimulus	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071944	cell periphery	CC
GO:0090351	seedling development	BP

KEGG Term	Name	Description
map04626	Plant-pathogen interaction	Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.