Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Qrob_T0535880.2.g
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Position
Qrob_Chr02:75317730-75324663 (+)
6933bp
Gene Type
gene
Gene Description (Protein Product)
zinc finger CCCH domain-containing protein
Organism
Quercus robur
Also AS AT5G56900

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Qrob_T0631200.2.g Crooked neck-like protein 1
Qrob_T0591780.2.g Pre-mRNA-splicing factor
Qrob_T0569930.2.g Pre-mRNA-splicing factor
Regulatory gene
Qrob_T0017090.2.g No apical meristem (NAM) protein
Qrob_T0017120.2.g NAC domain-containing protein
Qrob_T0047280.2.g dof zinc finger protein
Target gene
Qrob_T0008170.2.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress
Qrob_T0016570.2.g 5'-3' exoribonuclease
Qrob_T0039580.2.g PA domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC