Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Qrob_T0570500.2.g
View in Genome Browser
Position
Qrob_Chr06:50893829-50898998 (+)
5169bp
Gene Type
gene
Gene Description (Protein Product)
Vam6 Vps39-like protein
Organism
Quercus robur
Also AS AT4G36630

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Qrob_T0601360.2.g Belongs to the STXBP unc-18 SEC1 family
Qrob_T0733240.2.g Vacuolar protein sorting-associated protein 8 homolog
Qrob_T0631160.2.g Vacuolar protein sorting-associated protein 8 homolog

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000323 lytic vacuole CC
GO:0000325 plant-type vacuole CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005765 lysosomal membrane CC
GO:0005768 endosome CC
GO:0005770 late endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006906 vesicle fusion BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0007034 vacuolar transport BP
GO:0007041 lysosomal transport BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008333 endosome to lysosome transport BP
GO:0009056 catabolic process BP
GO:0009506 plasmodesma CC
GO:0009705 plant-type vacuole membrane CC
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0030054 cell junction CC
GO:0030897 HOPS complex CC
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031902 late endosome membrane CC
GO:0031982 vesicle CC
GO:0032991 protein-containing complex CC
GO:0034058 endosomal vesicle fusion BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044437 obsolete vacuolar part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048284 organelle fusion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055044 symplast CC
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090174 organelle membrane fusion BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0098852 lytic vacuole membrane CC
GO:0098876 vesicle-mediated transport to the plasma membrane BP
GO:0099023 vesicle tethering complex CC
GO:1902774 late endosome to lysosome transport BP
GO:1990126 endocytic recycling BP