PPGR - Gene Detail

Basic Information

Gene ID	Qrob_T0573060.2.g View in Genome Browser
Position	Qrob_Chr05:33836040-33838675 (-) 2635bp
Gene Type	gene
Gene Description (Protein Product)	isoform X1
Organism	Quercus robur
Also AS	AT2G34150

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Qrob_T0713840.2.g Functions as component of the Arp2 3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks

Qrob_T0710060.2.g Belongs to the actin family

Qrob_T0605080.2.g 14-3-3 homologues

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003779	actin binding	MF
GO:0003785	actin monomer binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005856	cytoskeleton	CC
GO:0008064	regulation of actin polymerization or depolymerization	BP
GO:0008092	cytoskeletal protein binding	MF
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0030832	regulation of actin filament length	BP
GO:0030833	regulation of actin filament polymerization	BP
GO:0030838	positive regulation of actin filament polymerization	BP
GO:0031209	SCAR complex	CC
GO:0031334	positive regulation of protein-containing complex assembly	BP
GO:0032271	regulation of protein polymerization	BP
GO:0032273	positive regulation of protein polymerization	BP
GO:0032535	regulation of cellular component size	BP
GO:0032956	regulation of actin cytoskeleton organization	BP
GO:0032970	regulation of actin filament-based process	BP
GO:0032991	protein-containing complex	CC
GO:0033043	regulation of organelle organization	BP
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043254	regulation of protein-containing complex assembly	BP
GO:0044087	regulation of cellular component biogenesis	BP
GO:0044089	positive regulation of cellular component biogenesis	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051125	regulation of actin nucleation	BP
GO:0051127	positive regulation of actin nucleation	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051493	regulation of cytoskeleton organization	BP
GO:0051495	positive regulation of cytoskeleton organization	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090066	regulation of anatomical structure size	BP
GO:0110053	regulation of actin filament organization	BP
GO:1902903	regulation of supramolecular fiber organization	BP
GO:1902905	positive regulation of supramolecular fiber organization	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00710	Carbon fixation in photosynthetic organisms	-
map00620	Pyruvate metabolism	-