PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Qrob_T0726730.2.g View in Genome Browser
Position	Qrob_Chr02:108639709-108641598 (+) 1889bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism	Quercus robur
Also AS	AT4G16270

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Qrob_T0728640.2.g Cinnamyl alcohol dehydrogenase Qrob_T0728680.2.g Cinnamyl alcohol dehydrogenase Qrob_T0761040.2.g Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Regulatory gene	Qrob_T0047280.2.g dof zinc finger protein Qrob_T0068730.2.g dof zinc finger protein Qrob_T0076400.2.g Cyclic dof factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.