Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Qrob_T0727850.2.g
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Position
Qrob_Chr03:19594448-19601813 (+)
7365bp
Gene Type
gene
Gene Description (Protein Product)
Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'
Organism
Quercus robur
Also AS AT3G04870

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Qrob_T0738120.2.g Uroporphyrinogen-III synthase
Qrob_T0746590.2.g 30S ribosomal protein 3
Qrob_T0750320.2.g calcium sensing receptor
Regulatory gene
Qrob_T0047280.2.g dof zinc finger protein
Qrob_T0068730.2.g dof zinc finger protein
Qrob_T0076400.2.g Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006629 lipid metabolic process BP
GO:0006720 isoprenoid metabolic process BP
GO:0006721 terpenoid metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008299 isoprenoid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009509 chromoplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0016108 tetraterpenoid metabolic process BP
GO:0016109 tetraterpenoid biosynthetic process BP
GO:0016114 terpenoid biosynthetic process BP
GO:0016116 carotenoid metabolic process BP
GO:0016117 carotenoid biosynthetic process BP
GO:0016119 carotene metabolic process BP
GO:0016120 carotene biosynthetic process BP
GO:0016491 oxidoreductase activity MF
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors MF
GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor MF
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0042214 terpene metabolic process BP
GO:0042440 pigment metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046246 terpene biosynthetic process BP
GO:0052886 9,9'-dicis-carotene:quinone oxidoreductase activity MF
GO:0052889 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:1901175 lycopene metabolic process BP
GO:1901177 lycopene biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00906 Carotenoid biosynthesis -