Basic Information
Gene ID
gene-DKX38_005291
Position
CM018574.1:16025451-16036384 (-)
10933bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear pore complex protein
Organism
Also AS AT1G55540

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-DKX38_009642 DEAD-box ATP-dependent RNA helicase
gene-DKX38_019798 Chromosome region maintenance protein 1 exportin
gene-DKX38_029327 Chromosome region maintenance protein 1 exportin
Regulatory gene
gene-DKX38_000614 Dof zinc finger protein
gene-DKX38_002292 Dof zinc finger protein
gene-DKX38_002742 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.