Basic Information
Gene Structure
Domain
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-DKX38_030170
View in Genome Browser
Position
VDCV01000024.1:405040-414556 (+)
9516bp
Gene Type
gene
Gene Description (Protein Product)
ABC transporter B family member
Organism
Salix brachista
Also AS AT5G39040

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description


Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0008150 biological_process BP
GO:0009705 plant-type vacuole membrane CC
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0010044 response to aluminum ion BP
GO:0010217 intracellular aluminum ion homeostasis BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015083 aluminum ion transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0016020 membrane CC
GO:0019725 cellular homeostasis BP
GO:0022857 transmembrane transporter activity MF
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0031090 organelle membrane CC
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055079 aluminum ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0098588 bounding membrane of organelle CC
GO:0098660 inorganic ion transmembrane transport BP
GO:0098771 inorganic ion homeostasis BP
GO:0098805 membrane CC
GO:1902602 aluminum ion transmembrane transport BP
KEGG Term Name Description
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).