PPGR - Gene Detail

Basic Information

Gene ID	gene-SADUNF_Sadunf01G0018900 View in Genome Browser
Position	CM027659.1:1409160-1409927 (+) 767bp
Gene Type	gene
Gene Description (Protein Product)	Encoded by
Organism	Salix dunnii
Also AS

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-SADUNF_Sadunf02G0127400 ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting

gene-SADUNF_Sadunf14G0050700 ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. Subsequently, the homodimer reverts towards the open dimer state, lowering its affinity for the membrane-bound receptor, and returning it to the cytosol to initiate a new round of targeting

gene-SADUNF_Sadunf01G0169600 Glycine-rich RNA-binding

Regulatory gene

gene-SADUNF_Sadunf01G0010300 zinc finger CCCH domain-containing protein

gene-SADUNF_Sadunf01G0022600 Myb/SANT-like DNA-binding domain

gene-SADUNF_Sadunf01G0024700 Myb/SANT-like DNA-binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000325	plant-type vacuole	CC
GO:0001101	response to acid chemical	BP
GO:0001558	regulation of cell growth	BP
GO:0003674	molecular_function	MF
GO:0005198	structural molecule activity	MF
GO:0005199	structural constituent of cell wall	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0009413	response to flooding	BP
GO:0009415	response to water	BP
GO:0009505	plant-type cell wall	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009737	response to abscisic acid	BP
GO:0009751	response to salicylic acid	BP
GO:0010033	response to organic substance	BP
GO:0010035	response to inorganic substance	BP
GO:0014070	response to organic cyclic compound	BP
GO:0030307	positive regulation of cell growth	BP
GO:0030312	external encapsulating structure	CC
GO:0033993	response to lipid	BP
GO:0040008	regulation of growth	BP
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045927	positive regulation of growth	BP
GO:0046620	regulation of organ growth	BP
GO:0046622	positive regulation of organ growth	BP
GO:0046677	response to antibiotic	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048638	regulation of developmental growth	BP
GO:0048639	positive regulation of developmental growth	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051094	positive regulation of developmental process	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051240	positive regulation of multicellular organismal process	BP
GO:0065007	biological regulation	BP
GO:0071944	cell periphery	CC
GO:0097305	response to alcohol	BP
GO:1901700	response to oxygen-containing compound	BP