Basic Information
Gene ID
gene-SADUNF_Sadunf16G0076100
Position
CM027674.1:8559694-8567412 (-)
7718bp
Gene Type
gene
Gene Description (Protein Product)
RING/Ubox like zinc-binding domain
Organism
Also AS AT5G60170

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-SADUNF_Sadunf19G0038800 General negative regulator of transcription subunit
gene-SADUNF_Sadunf19G0053100 Binds the poly(A) tail of mRNA
gene-SADUNF_Sadunf19G0080900 Binds the poly(A) tail of mRNA

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03018 RNA degradation The correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay exist and both pathways are initiated by poly(A) shortening of the mRNA. In the 5' to 3' pathway, this is followed by decapping which then permits the 5' to 3' exonucleolytic degradation of transcripts. In the 3' to 5' pathway, the exosome, a large multisubunit complex, plays a key role. The exosome exists in archaeal cells, too. In bacteria, endoribonuclease E, a key enzyme involved in RNA decay and processing, organizes a protein complex called degradosome. RNase E or R interacts with the phosphate-dependent exoribonuclease polynucleotide phosphorylase, DEAD-box helicases, and additional factors in the RNA-degrading complex.