Basic Information
Gene ID
Sapur.016G213700.v5.1
Position
Chr16:22132666-22134833 (+)
2167bp
Gene Type
gene
Gene Description (Protein Product)
Pectate lyase
Organism
Also AS AT3G27400

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Sapur.016G219400.v5.1 Polygalacturonase
Sapur.15WG061000.v5.1 Pectinesterase
Sapur.017G002500.v5.1 Polygalacturonase-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009624 response to nematode BP
GO:0043207 response to external biotic stimulus BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -