Basic Information
Gene ID
gene-IMY05_006G0064900
Position
CM029804.1:4873791-4881244 (+)
7453bp
Gene Type
gene
Gene Description (Protein Product)
U3 small nucleolar RNA-associated protein
Organism
Also AS AT4G04940

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_016G0149800 Periodic tryptophan protein
gene-IMY05_006G0102600 WD repeat-containing protein
gene-IMY05_013G0078000 Transducin beta-like protein
Regulatory gene
gene-IMY05_001G0007200 protein FAR1-RELATED SEQUENCE
gene-IMY05_001G0007900 protein FAR1-RELATED SEQUENCE
gene-IMY05_001G0018400 Protein FAR-RED ELONGATED HYPOCOTYL

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.