Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_008G0146200
View in Genome Browser
Position
CM029806.1:11243270-11262312 (+)
19042bp
Gene Type
gene
Gene Description (Protein Product)
Chromatin structure-remodeling complex protein
Organism
Salix suchowensis
Also AS AT2G28290

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4501000400 Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression
gene-IMY05_C4501000300 Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression
gene-IMY05_011G0031900 RNA polymerase-associated protein
Regulatory gene
gene-IMY05_001G0028100 Zinc finger protein
gene-IMY05_001G0034000 Transcription factor bHLH106-like
gene-IMY05_001G0047500 Transcription factor bHLH130-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000166 nucleotide binding MF
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0000988 obsolete transcription factor activity, protein binding MF
GO:0000990 obsolete transcription factor activity, core RNA polymerase binding MF
GO:0000991 obsolete transcription factor activity, core RNA polymerase II binding MF
GO:0002831 regulation of response to biotic stimulus BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003678 DNA helicase activity MF
GO:0003824 catalytic activity MF
GO:0004003 DNA helicase activity MF
GO:0004386 helicase activity MF
GO:0005488 binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006351 DNA-templated transcription BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006366 transcription by RNA polymerase II BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0008026 helicase activity MF
GO:0008094 ATP-dependent activity, acting on DNA MF
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009611 response to wounding BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0009889 regulation of biosynthetic process BP
GO:0009908 flower development BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010104 regulation of ethylene-activated signaling pathway BP
GO:0010199 organ boundary specification between lateral organs and the meristem BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010646 regulation of cell communication BP
GO:0010959 regulation of metal ion transport BP
GO:0016043 cellular component organization BP
GO:0016070 RNA metabolic process BP
GO:0016462 pyrophosphatase activity MF
GO:0016514 SWI/SNF complex CC
GO:0016586 RSC-type complex CC
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0022414 reproductive process BP
GO:0023051 regulation of signaling BP
GO:0030554 adenyl nucleotide binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031347 regulation of defense response BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032101 regulation of response to external stimulus BP
GO:0032392 DNA geometric change BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032508 DNA duplex unwinding BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032774 RNA biosynthetic process BP
GO:0032879 regulation of localization BP
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0034756 regulation of iron ion transport BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0040029 epigenetic regulation of gene expression BP
GO:0042623 ATP hydrolysis activity MF
GO:0043044 chromatin remodeling BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043269 regulation of monoatomic ion transport BP
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048367 shoot system development BP
GO:0048583 regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048859 formation of anatomical boundary BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051276 chromosome organization BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070035 obsolete purine NTP-dependent helicase activity MF
GO:0070297 regulation of phosphorelay signal transduction system BP
GO:0070603 SWI/SNF superfamily-type complex CC
GO:0071103 DNA conformation change BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090304 nucleic acid metabolic process BP
GO:0090567 reproductive shoot system development BP
GO:0090691 formation of plant organ boundary BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097659 nucleic acid-templated transcription BP
GO:0140097 catalytic activity, acting on DNA MF
GO:0140110 transcription regulator activity MF
GO:1900150 regulation of defense response to fungus BP
GO:1900390 regulation of iron ion transport BP
GO:1900393 obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter BP
GO:1900400 obsolete regulation of iron ion import into cell by regulation of transcription from RNA polymerase II promoter BP
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901576 organic substance biosynthetic process BP
GO:1902494 catalytic complex CC
GO:1902531 regulation of intracellular signal transduction BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1904949 ATPase complex CC
GO:2000022 regulation of jasmonic acid mediated signaling pathway BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP