Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_014G0102600
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Position
CM029812.1:7977669-7984330 (+)
6661bp
Gene Type
gene
Gene Description (Protein Product)
Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome
Organism
Salix suchowensis
Also AS AT3G53760

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4594000100 14-3-3 protein
gene-IMY05_017G0027000 Ubiquitin family
gene-IMY05_017G0026400 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
Regulatory gene
gene-IMY05_001G0018600 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
gene-IMY05_001G0019700 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
gene-IMY05_001G0051100 Dehydration-responsive element-binding protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000923 equatorial microtubule organizing center CC
GO:0000930 gamma-tubulin complex CC
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005815 microtubule organizing center CC
GO:0005819 spindle CC
GO:0005856 cytoskeleton CC
GO:0005911 cell-cell junction CC
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007020 microtubule nucleation BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007052 mitotic spindle organization BP
GO:0008092 cytoskeletal protein binding MF
GO:0008150 biological_process BP
GO:0009506 plasmodesma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009624 response to nematode BP
GO:0009987 cellular process BP
GO:0015630 microtubule cytoskeleton CC
GO:0015631 tubulin binding MF
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030054 cell junction CC
GO:0030865 cortical cytoskeleton organization BP
GO:0031109 microtubule polymerization or depolymerization BP
GO:0031122 cytoplasmic microtubule organization BP
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032991 protein-containing complex CC
GO:0034622 protein-containing complex assembly BP
GO:0040007 growth BP
GO:0043015 gamma-tubulin binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043622 cortical microtubule organization BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044450 obsolete microtubule organizing center part CC
GO:0044464 obsolete cell part CC
GO:0046785 microtubule polymerization BP
GO:0048285 organelle fission BP
GO:0050896 response to stimulus BP
GO:0051225 spindle assembly BP
GO:0051258 protein polymerization BP
GO:0051321 meiotic cell cycle BP
GO:0051415 microtubule nucleation by interphase microtubule organizing center BP
GO:0051418 microtubule nucleation by microtubule organizing center BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055044 symplast CC
GO:0065003 protein-containing complex assembly BP
GO:0070925 organelle assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090307 mitotic spindle assembly BP
GO:0097435 supramolecular fiber organization BP
GO:0140014 mitotic nuclear division BP
GO:1902850 microtubule cytoskeleton organization involved in mitosis BP
GO:1903047 mitotic cell cycle process BP