PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_017G0064800 View in Genome Browser
Position	CM029815.1:8111850-8113482 (-) 1632bp
Gene Type	gene
Gene Description (Protein Product)	"Tubulin is the major constituent of microtubules. It binds two moles of GTP
Organism	Salix suchowensis
Also AS	AT4G14960

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C0318000100 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

gene-IMY05_017G0089700 protein domain specific binding

gene-IMY05_C2424000100 Belongs to the 14-3-3 family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000226	microtubule cytoskeleton organization	BP
GO:0003674	molecular_function	MF
GO:0005198	structural molecule activity	MF
GO:0005200	structural constituent of cytoskeleton	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005730	nucleolus	CC
GO:0005737	cytoplasm	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0005856	cytoskeleton	CC
GO:0005874	microtubule	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0006996	organelle organization	BP
GO:0007010	cytoskeleton organization	BP
GO:0007017	microtubule-based process	BP
GO:0008150	biological_process	BP
GO:0009506	plasmodesma	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009629	response to gravity	BP
GO:0009651	response to salt stress	BP
GO:0009987	cellular process	BP
GO:0015630	microtubule cytoskeleton	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0030054	cell junction	CC
GO:0030312	external encapsulating structure	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045298	tubulin complex	CC
GO:0050896	response to stimulus	BP
GO:0051716	cellular response to stimulus	BP
GO:0055044	symplast	CC
GO:0070013	intracellular organelle lumen	CC
GO:0071214	cellular response to abiotic stimulus	BP
GO:0071258	cellular response to gravity	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0099080	supramolecular complex	CC
GO:0099081	supramolecular polymer	CC
GO:0099512	supramolecular fiber	CC
GO:0099513	polymeric cytoskeletal fiber	CC
GO:0104004	cellular response to environmental stimulus	BP

KEGG Term	Name	Description
map04145	Phagosome	Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.