PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_017G0075400 View in Genome Browser
Position	CM029815.1:9542812-9544401 (+) 1589bp
Gene Type	gene
Gene Description (Protein Product)	40S ribosomal protein
Organism	Salix suchowensis
Also AS	AT5G61170

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4588000500 ubiquitin-60S ribosomal protein

gene-IMY05_C4613000100 60S ribosomal protein L4 C-terminal domain

gene-IMY05_018G0040500 Belongs to the universal ribosomal protein uS3 family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000028	ribosomal small subunit assembly	BP
GO:0003674	molecular_function	MF
GO:0003735	structural constituent of ribosome	MF
GO:0005198	structural molecule activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005840	ribosome	CC
GO:0005844	polysome	CC
GO:0005911	cell-cell junction	CC
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009506	plasmodesma	CC
GO:0009987	cellular process	BP
GO:0015935	small ribosomal subunit	CC
GO:0016043	cellular component organization	BP
GO:0022607	cellular component assembly	BP
GO:0022613	ribonucleoprotein complex biogenesis	BP
GO:0022618	ribonucleoprotein complex assembly	BP
GO:0022626	cytosolic ribosome	CC
GO:0022627	cytosolic small ribosomal subunit	CC
GO:0030054	cell junction	CC
GO:0030312	external encapsulating structure	CC
GO:0032991	protein-containing complex	CC
GO:0034622	protein-containing complex assembly	BP
GO:0042254	ribosome biogenesis	BP
GO:0042255	ribosome assembly	BP
GO:0042274	ribosomal small subunit biogenesis	BP
GO:0042788	polysomal ribosome	CC
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044391	ribosomal subunit	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044445	obsolete cytosolic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0055044	symplast	CC
GO:0065003	protein-containing complex assembly	BP
GO:0070925	organelle assembly	BP
GO:0071826	ribonucleoprotein complex subunit organization	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:1990904	ribonucleoprotein complex	CC

KEGG Term	Name	Description
map03010	Ribosome	-