PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_017G0115900 View in Genome Browser
Position	CM029815.1:13394694-13398370 (+) 3676bp
Gene Type	gene
Gene Description (Protein Product)	"Proteinaceous RNase P 1
Organism	Salix suchowensis
Also AS	AT2G32230

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_018G0041000 tRNA (Guanine-1)-methyltransferase

gene-IMY05_C4193000100 tRNA (Guanine-1)-methyltransferase

gene-IMY05_017G0120200 NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit 5

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000966	RNA 5'-end processing	BP
GO:0001682	tRNA 5'-leader removal	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004518	nuclease activity	MF
GO:0004519	endonuclease activity	MF
GO:0004521	RNA endonuclease activity	MF
GO:0004526	ribonuclease P activity	MF
GO:0004540	ribonuclease activity	MF
GO:0004549	tRNA-specific ribonuclease activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006396	RNA processing	BP
GO:0006399	tRNA metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008033	tRNA processing	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0016070	RNA metabolic process	BP
GO:0016787	hydrolase activity	MF
GO:0016788	hydrolase activity, acting on ester bonds	MF
GO:0016891	RNA endonuclease activity, producing 5'-phosphomonoesters	MF
GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	MF
GO:0034470	ncRNA processing	BP
GO:0034471	ncRNA 5'-end processing	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034660	ncRNA metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046483	heterocycle metabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0090305	nucleic acid phosphodiester bond hydrolysis	BP
GO:0090501	RNA phosphodiester bond hydrolysis	BP
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	BP
GO:0099116	tRNA 5'-end processing	BP
GO:0140098	catalytic activity, acting on RNA	MF
GO:0140101	catalytic activity, acting on a tRNA	MF
GO:1901360	organic cyclic compound metabolic process	BP