PPGR - Gene Detail

Basic Information

Gene ID	gene-IMY05_018G0044800 View in Genome Browser
Position	CM029816.1:4445127-4451143 (-) 6016bp
Gene Type	gene
Gene Description (Protein Product)	Exonuclease 3'-5' domain-containing protein
Organism	Salix suchowensis
Also AS	AT2G25910

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_018G0077900 FGGY carbohydrate kinase domain-containing

gene-IMY05_C1097000900 Staphylococcal nuclease domain-containing protein

gene-IMY05_C4875000100 helix loop helix domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009892	negative regulation of metabolic process	BP
GO:0009987	cellular process	BP
GO:0010468	regulation of gene expression	BP
GO:0010605	negative regulation of macromolecule metabolic process	BP
GO:0010629	negative regulation of gene expression	BP
GO:0016070	RNA metabolic process	BP
GO:0016458	obsolete gene silencing	BP
GO:0019222	regulation of metabolic process	BP
GO:0031047	RNA-mediated gene silencing	BP
GO:0032991	protein-containing complex	CC
GO:0034587	piRNA processing	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034660	ncRNA metabolic process	BP
GO:0035770	ribonucleoprotein granule	CC
GO:0036464	cytoplasmic ribonucleoprotein granule	CC
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043186	P granule	CC
GO:0043226	organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0045495	pole plasm	CC
GO:0046483	heterocycle metabolic process	BP
GO:0046983	protein dimerization activity	MF
GO:0048519	negative regulation of biological process	BP
GO:0050789	regulation of biological process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0060293	germ plasm	CC
GO:0065007	biological regulation	BP
GO:0071704	organic substance metabolic process	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1990904	ribonucleoprotein complex	CC
GO:1990923	PET complex	CC