PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_018G0071800 View in Genome Browser
Position	CM029816.1:8754092-8759467 (+) 5375bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the hexokinase family
Organism	Salix suchowensis
Also AS	AT2G19860

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_018G0090500 Belongs to the aldehyde dehydrogenase family

gene-IMY05_C4525000800 ATP synthase alpha/beta family, beta-barrel domain

gene-IMY05_C2354000200 Belongs to the carbohydrate kinase PfkB family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0001047	core promoter sequence-specific DNA binding	MF
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0001678	intracellular glucose homeostasis	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003824	catalytic activity	MF
GO:0004340	glucokinase activity	MF
GO:0004396	hexokinase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005740	mitochondrial envelope	CC
GO:0005741	mitochondrial outer membrane	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005829	cytosol	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006090	pyruvate metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006096	glycolytic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006164	purine nucleotide biosynthetic process	BP
GO:0006165	nucleoside diphosphate phosphorylation	BP
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006357	regulation of transcription by RNA polymerase II	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006733	obsolete oxidoreduction coenzyme metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006754	ATP biosynthetic process	BP
GO:0006757	ATP generation from ADP	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006833	water transport	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008219	cell death	BP
GO:0008270	zinc ion binding	MF
GO:0008865	fructokinase activity	MF
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009123	nucleoside monophosphate metabolic process	BP
GO:0009124	nucleoside monophosphate biosynthetic process	BP
GO:0009126	purine nucleoside monophosphate metabolic process	BP
GO:0009127	purine nucleoside monophosphate biosynthetic process	BP
GO:0009132	nucleoside diphosphate metabolic process	BP
GO:0009135	purine nucleoside diphosphate metabolic process	BP
GO:0009141	nucleoside triphosphate metabolic process	BP
GO:0009142	nucleoside triphosphate biosynthetic process	BP
GO:0009144	purine nucleoside triphosphate metabolic process	BP
GO:0009145	purine nucleoside triphosphate biosynthetic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009152	purine ribonucleotide biosynthetic process	BP
GO:0009156	ribonucleoside monophosphate biosynthetic process	BP
GO:0009161	ribonucleoside monophosphate metabolic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009166	nucleotide catabolic process	BP
GO:0009167	purine ribonucleoside monophosphate metabolic process	BP
GO:0009168	purine ribonucleoside monophosphate biosynthetic process	BP
GO:0009179	purine ribonucleoside diphosphate metabolic process	BP
GO:0009185	ribonucleoside diphosphate metabolic process	BP
GO:0009199	ribonucleoside triphosphate metabolic process	BP
GO:0009201	ribonucleoside triphosphate biosynthetic process	BP
GO:0009205	purine ribonucleoside triphosphate metabolic process	BP
GO:0009206	purine ribonucleoside triphosphate biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009536	plastid	CC
GO:0009743	response to carbohydrate	BP
GO:0009746	response to hexose	BP
GO:0009747	hexokinase-dependent signaling	BP
GO:0009749	response to glucose	BP
GO:0009756	carbohydrate mediated signaling	BP
GO:0009757	hexose mediated signaling	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010118	stomatal movement	BP
GO:0010148	transpiration	BP
GO:0010182	sugar mediated signaling pathway	BP
GO:0010255	glucose mediated signaling pathway	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0012501	programmed cell death	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016052	carbohydrate catabolic process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016301	kinase activity	MF
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016773	phosphotransferase activity, alcohol group as acceptor	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0018130	heterocycle biosynthetic process	BP
GO:0019158	mannokinase activity	MF
GO:0019200	carbohydrate kinase activity	MF
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0019318	hexose metabolic process	BP
GO:0019320	hexose catabolic process	BP
GO:0019359	nicotinamide nucleotide biosynthetic process	BP
GO:0019362	pyridine nucleotide metabolic process	BP
GO:0019363	pyridine nucleotide biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019725	cellular homeostasis	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019867	outer membrane	CC
GO:0023052	signaling	BP
GO:0031090	organelle membrane	CC
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031300	obsolete intrinsic component of organelle membrane	CC
GO:0031301	obsolete integral component of organelle membrane	CC
GO:0031306	obsolete intrinsic component of mitochondrial outer membrane	CC
GO:0031307	obsolete integral component of mitochondrial outer membrane	CC
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0031966	mitochondrial membrane	CC
GO:0031967	organelle envelope	CC
GO:0031968	organelle outer membrane	CC
GO:0031975	envelope	CC
GO:0032592	obsolete integral component of mitochondrial membrane	CC
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0032991	protein-containing complex	CC
GO:0033500	carbohydrate homeostasis	BP
GO:0034284	response to monosaccharide	BP
GO:0034404	nucleobase-containing small molecule biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0034655	nucleobase-containing compound catabolic process	BP
GO:0042044	fluid transport	BP
GO:0042221	response to chemical	BP
GO:0042592	homeostatic process	BP
GO:0042593	glucose homeostasis	BP
GO:0042866	pyruvate biosynthetic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044262	cellular carbohydrate metabolic process	BP
GO:0044270	cellular nitrogen compound catabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044429	obsolete mitochondrial part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044455	obsolete mitochondrial membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0046031	ADP metabolic process	BP
GO:0046034	ATP metabolic process	BP
GO:0046365	monosaccharide catabolic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046434	organophosphate catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046496	nicotinamide nucleotide metabolic process	BP
GO:0046700	heterocycle catabolic process	BP
GO:0046835	carbohydrate phosphorylation	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0046939	nucleotide phosphorylation	BP
GO:0048878	chemical homeostasis	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051156	glucose 6-phosphate metabolic process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051179	localization	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0051234	establishment of localization	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0055082	intracellular chemical homeostasis	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071310	cellular response to organic substance	BP
GO:0071322	cellular response to carbohydrate stimulus	BP
GO:0071326	cellular response to monosaccharide stimulus	BP
GO:0071331	cellular response to hexose stimulus	BP
GO:0071333	cellular response to glucose stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0072522	purine-containing compound biosynthetic process	BP
GO:0072524	pyridine-containing compound metabolic process	BP
GO:0072525	pyridine-containing compound biosynthetic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090332	stomatal closure	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098573	obsolete intrinsic component of mitochondrial membrane	CC
GO:0098588	bounding membrane of organelle	CC
GO:0098805	membrane	CC
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901292	nucleoside phosphate catabolic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00524	Butirosin and neomycin biosynthesis	-
map00520	Amino sugar and nucleotide sugar metabolism	-
map00500	Starch and sucrose metabolism	-
map00052	Galactose metabolism	-
map00051	Fructose and mannose metabolism	-
map00010	Glycolysis / Gluconeogenesis	Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].