Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4272000200
View in Genome Browser
Position
JAEQKX010000602.1:1617-3183 (+)
1566bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the actin family
Organism
Salix suchowensis
Also AS AT3G53750

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4525000800 ATP synthase alpha/beta family, beta-barrel domain
gene-IMY05_C4594000100 14-3-3 protein
gene-IMY05_C4317000900 Belongs to the actin family

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000001 mitochondrion inheritance BP
GO:0000003 reproduction BP
GO:0000011 vacuole inheritance BP
GO:0000123 histone acetyltransferase complex CC
GO:0000132 establishment of mitotic spindle orientation BP
GO:0000142 cellular bud neck contractile ring CC
GO:0000226 microtubule cytoskeleton organization BP
GO:0000228 nuclear chromosome CC
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0000812 Swr1 complex CC
GO:0000910 cytokinesis BP
GO:0000912 assembly of actomyosin apparatus involved in cytokinesis BP
GO:0000915 actomyosin contractile ring assembly BP
GO:0000916 actomyosin contractile ring contraction BP
GO:0001300 obsolete chronological cell aging BP
GO:0001411 hyphal tip CC
GO:0002790 peptide secretion BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005628 prospore membrane CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005694 chromosome CC
GO:0005737 cytoplasm CC
GO:0005826 actomyosin contractile ring CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0005884 actin filament CC
GO:0005933 cellular bud CC
GO:0005935 cellular bud neck CC
GO:0005937 mating projection CC
GO:0005938 cell cortex CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006464 protein modification process BP
GO:0006473 protein acetylation BP
GO:0006475 internal protein amino acid acetylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006887 exocytosis BP
GO:0006897 endocytosis BP
GO:0006928 obsolete movement of cell or subcellular component BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006979 response to oxidative stress BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007033 vacuole organization BP
GO:0007049 cell cycle BP
GO:0007114 cell budding BP
GO:0007117 budding cell bud growth BP
GO:0007119 budding cell isotropic bud growth BP
GO:0007163 establishment or maintenance of cell polarity BP
GO:0007568 aging BP
GO:0007569 obsolete cell aging BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008360 regulation of cell shape BP
GO:0009272 fungal-type cell wall biogenesis BP
GO:0009306 protein secretion BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0015031 protein transport BP
GO:0015629 actin cytoskeleton CC
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016573 histone acetylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0018393 internal peptidyl-lysine acetylation BP
GO:0018394 peptidyl-lysine acetylation BP
GO:0019538 protein metabolic process BP
GO:0019953 sexual reproduction BP
GO:0019954 asexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022413 reproductive process in single-celled organism BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0022604 regulation of cell morphogenesis BP
GO:0022607 cellular component assembly BP
GO:0030010 establishment of cell polarity BP
GO:0030029 actin filament-based process BP
GO:0030036 actin cytoskeleton organization BP
GO:0030048 actin filament-based movement BP
GO:0030050 vesicle transport along actin filament BP
GO:0030154 cell differentiation BP
GO:0030427 site of polarized growth CC
GO:0030435 sporulation resulting in formation of a cellular spore BP
GO:0030437 ascospore formation BP
GO:0030476 ascospore wall assembly BP
GO:0030479 actin cortical patch CC
GO:0030705 cytoskeleton-dependent intracellular transport BP
GO:0030863 cortical cytoskeleton CC
GO:0030864 cortical actin cytoskeleton CC
GO:0030865 cortical cytoskeleton organization BP
GO:0030866 cortical actin cytoskeleton organization BP
GO:0031011 Ino80 complex CC
GO:0031032 actomyosin structure organization BP
GO:0031248 protein acetyltransferase complex CC
GO:0031505 fungal-type cell wall organization BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032153 cell division site CC
GO:0032155 obsolete cell division site part CC
GO:0032432 actin filament bundle CC
GO:0032502 developmental process BP
GO:0032505 reproduction of a single-celled organism BP
GO:0032506 cytokinetic process BP
GO:0032940 secretion by cell BP
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033202 DNA helicase complex CC
GO:0033554 cellular response to stress BP
GO:0034293 sexual sporulation BP
GO:0034599 cellular response to oxidative stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034728 nucleosome organization BP
GO:0035267 NuA4 histone acetyltransferase complex CC
GO:0036211 protein modification process BP
GO:0036213 contractile ring contraction BP
GO:0040001 establishment of mitotic spindle localization BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0042244 spore wall assembly BP
GO:0042546 cell wall biogenesis BP
GO:0042763 intracellular immature spore CC
GO:0042764 ascospore-type prospore CC
GO:0042886 amide transport BP
GO:0042995 cell projection CC
GO:0043044 chromatin remodeling BP
GO:0043170 macromolecule metabolic process BP
GO:0043189 H4/H2A histone acetyltransferase complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043332 mating projection tip CC
GO:0043412 macromolecule modification BP
GO:0043486 obsolete histone exchange BP
GO:0043543 protein acylation BP
GO:0043933 protein-containing complex organization BP
GO:0043934 sporulation BP
GO:0043935 sexual sporulation resulting in formation of a cellular spore BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044448 obsolete cell cortex part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044837 actomyosin contractile ring organization BP
GO:0045184 establishment of protein localization BP
GO:0045229 external encapsulating structure organization BP
GO:0046483 heterocycle metabolic process BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048308 organelle inheritance BP
GO:0048311 mitochondrion distribution BP
GO:0048468 cell development BP
GO:0048471 perinuclear region of cytoplasm CC
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051276 chromosome organization BP
GO:0051286 cell tip CC
GO:0051293 establishment of spindle localization BP
GO:0051294 establishment of spindle orientation BP
GO:0051301 cell division BP
GO:0051321 meiotic cell cycle BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051646 mitochondrion localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051653 spindle localization BP
GO:0051656 establishment of organelle localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0060303 obsolete regulation of nucleosome density BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0061645 endocytic patch CC
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0070590 spore wall biogenesis BP
GO:0070591 ascospore wall biogenesis BP
GO:0070603 SWI/SNF superfamily-type complex CC
GO:0070726 cell wall assembly BP
GO:0070887 cellular response to chemical stimulus BP
GO:0070938 contractile ring CC
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071852 fungal-type cell wall organization or biogenesis BP
GO:0071940 fungal-type cell wall assembly BP
GO:0071944 cell periphery CC
GO:0071963 establishment or maintenance of cell polarity regulating cell shape BP
GO:0090304 nucleic acid metabolic process BP
GO:0097346 INO80-type complex CC
GO:0098657 import into cell BP
GO:0099080 supramolecular complex CC
GO:0099081 supramolecular polymer CC
GO:0099512 supramolecular fiber CC
GO:0099513 polymeric cytoskeletal fiber CC
GO:0099515 actin filament-based transport BP
GO:0099518 vesicle cytoskeletal trafficking BP
GO:0099568 cytoplasmic region CC
GO:0110085 mitotic actomyosin contractile ring CC
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:0120104 mitotic actomyosin contractile ring, proximal layer CC
GO:0120105 mitotic actomyosin contractile ring, intermediate layer CC
GO:0120106 mitotic actomyosin contractile ring, distal actin filament layer CC
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1902407 assembly of actomyosin apparatus involved in mitotic cytokinesis BP
GO:1902410 mitotic cytokinetic process BP
GO:1902493 acetyltransferase complex CC
GO:1902494 catalytic complex CC
GO:1902562 H4 histone acetyltransferase complex CC
GO:1902850 microtubule cytoskeleton organization involved in mitosis BP
GO:1903046 meiotic cell cycle process BP
GO:1903047 mitotic cell cycle process BP
GO:1903475 mitotic actomyosin contractile ring assembly BP
GO:1904949 ATPase complex CC
GO:1990234 transferase complex CC
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.