PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_C4371000100 View in Genome Browser
Position	JAEQKX010000627.1:1908-3691 (+) 1783bp
Gene Type	gene
Gene Description (Protein Product)	"Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway
Organism	Salix suchowensis
Also AS	AT3G27300

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4518000300 Belongs to the hexokinase family

gene-IMY05_C4617000500 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

gene-IMY05_C4501000600 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0000302	response to reactive oxygen species	BP
GO:0002262	myeloid cell homeostasis	BP
GO:0002376	immune system process	BP
GO:0002520	immune system development	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004345	glucose-6-phosphate dehydrogenase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005536	glucose binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006066	alcohol metabolic process	BP
GO:0006081	cellular aldehyde metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006098	pentose-phosphate shunt	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006518	peptide metabolic process	BP
GO:0006575	cellular modified amino acid metabolic process	BP
GO:0006629	lipid metabolic process	BP
GO:0006694	steroid biosynthetic process	BP
GO:0006695	cholesterol biosynthetic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006733	obsolete oxidoreduction coenzyme metabolic process	BP
GO:0006739	NADP metabolic process	BP
GO:0006740	NADPH regeneration	BP
GO:0006749	glutathione metabolic process	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008202	steroid metabolic process	BP
GO:0008203	cholesterol metabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009051	pentose-phosphate shunt, oxidative branch	BP
GO:0009058	biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009636	response to toxic substance	BP
GO:0009892	negative regulation of metabolic process	BP
GO:0009898	cytoplasmic side of plasma membrane	CC
GO:0009987	cellular process	BP
GO:0010035	response to inorganic substance	BP
GO:0010605	negative regulation of macromolecule metabolic process	BP
GO:0010732	regulation of protein glutathionylation	BP
GO:0010734	negative regulation of protein glutathionylation	BP
GO:0016020	membrane	CC
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016125	sterol metabolic process	BP
GO:0016126	sterol biosynthetic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0019222	regulation of metabolic process	BP
GO:0019321	pentose metabolic process	BP
GO:0019322	pentose biosynthetic process	BP
GO:0019362	pyridine nucleotide metabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019682	glyceraldehyde-3-phosphate metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0021700	developmental maturation	BP
GO:0030097	hemopoiesis	BP
GO:0030099	myeloid cell differentiation	BP
GO:0030154	cell differentiation	BP
GO:0030218	erythrocyte differentiation	BP
GO:0030246	carbohydrate binding	MF
GO:0031323	regulation of cellular metabolic process	BP
GO:0031324	negative regulation of cellular metabolic process	BP
GO:0031399	regulation of protein modification process	BP
GO:0031400	negative regulation of protein modification process	BP
GO:0032268	regulation of protein metabolic process	BP
GO:0032269	negative regulation of protein metabolic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0033554	cellular response to stress	BP
GO:0034101	erythrocyte homeostasis	BP
GO:0034599	cellular response to oxidative stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0036094	small molecule binding	MF
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042542	response to hydrogen peroxide	BP
GO:0042592	homeostatic process	BP
GO:0042802	identical protein binding	MF
GO:0042803	protein homodimerization activity	MF
GO:0043249	erythrocyte maturation	BP
GO:0043603	amide metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0046165	alcohol biosynthetic process	BP
GO:0046364	monosaccharide biosynthetic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046496	nicotinamide nucleotide metabolic process	BP
GO:0046677	response to antibiotic	BP
GO:0046983	protein dimerization activity	MF
GO:0048029	monosaccharide binding	MF
GO:0048037	obsolete cofactor binding	MF
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048513	animal organ development	BP
GO:0048519	negative regulation of biological process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0048534	hematopoietic or lymphoid organ development	BP
GO:0048731	system development	BP
GO:0048821	erythrocyte development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0048872	homeostasis of number of cells	BP
GO:0050661	NADP binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051156	glucose 6-phosphate metabolic process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051172	negative regulation of nitrogen compound metabolic process	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051248	negative regulation of protein metabolic process	BP
GO:0051716	cellular response to stimulus	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061515	myeloid cell development	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071695	anatomical structure maturation	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0072524	pyridine-containing compound metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098552	side of membrane	CC
GO:0098562	cytoplasmic side of membrane	CC
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901265	nucleoside phosphate binding	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1902652	secondary alcohol metabolic process	BP
GO:1902653	secondary alcohol biosynthetic process	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00480	Glutathione metabolism	-
map00030	Pentose phosphate pathway	The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].