Basic Information
Gene ID
gene-IMY05_C4398001300
Position
JAEQKX010000640.1:48026-48907 (-)
881bp
Gene Type
gene
Gene Description (Protein Product)
Autophagy protein Apg6
Organism
Also AS AT3G61710

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4814000200 Serine threonine-protein kinase TOR
gene-IMY05_C4814000400 Serine threonine-protein kinase TOR
gene-IMY05_C4814000300 atypical PIKK FRAP protein kinase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000322 storage vacuole CC
GO:0000323 lytic vacuole CC
GO:0000324 fungal-type vacuole CC
GO:0000329 fungal-type vacuole membrane CC
GO:0000407 phagophore assembly site CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005829 cytosol CC
GO:0005942 phosphatidylinositol 3-kinase complex CC
GO:0006629 lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006650 glycerophospholipid metabolic process BP
GO:0006661 phosphatidylinositol biosynthetic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006810 transport BP
GO:0006914 autophagy BP
GO:0006950 response to stress BP
GO:0006995 cellular response to nitrogen starvation BP
GO:0006996 organelle organization BP
GO:0007033 vacuole organization BP
GO:0007034 vacuolar transport BP
GO:0007154 cell communication BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016236 macroautophagy BP
GO:0016237 lysosomal microautophagy BP
GO:0016482 cytosolic transport BP
GO:0019637 organophosphate metabolic process BP
GO:0019898 extrinsic component of membrane CC
GO:0022607 cellular component assembly BP
GO:0030242 autophagy of peroxisome BP
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0031982 vesicle CC
GO:0032258 cytoplasm to vacuole transport by the Cvt pathway BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0033554 cellular response to stress BP
GO:0034045 phagophore assembly site membrane CC
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I CC
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II CC
GO:0034613 protein localization BP
GO:0034727 piecemeal microautophagy of the nucleus BP
GO:0035032 phosphatidylinositol 3-kinase complex, class III CC
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043562 cellular response to nitrogen levels BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044804 autophagy of nucleus BP
GO:0045017 glycerolipid biosynthetic process BP
GO:0045324 late endosome to vacuole transport BP
GO:0046474 glycerophospholipid biosynthetic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0046488 phosphatidylinositol metabolic process BP
GO:0046907 intracellular transport BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051716 cellular response to stimulus BP
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0061919 process utilizing autophagic mechanism BP
GO:0070727 cellular macromolecule localization BP
GO:0070925 organelle assembly BP
GO:0071496 cellular response to external stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072665 protein localization to vacuole BP
GO:0090407 organophosphate biosynthetic process BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:0098852 lytic vacuole membrane CC
GO:1901576 organic substance biosynthetic process BP
GO:1902494 catalytic complex CC
GO:1905037 autophagosome organization BP
GO:1990234 transferase complex CC