Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4458000600
View in Genome Browser
Position
JAEQKX010000670.1:17118-18160 (+)
1042bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Organism
Salix suchowensis
Also AS AT1G80600

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4460001600 argininosuccinate lyase
gene-IMY05_C4719000200 carbamoyl-phosphate
gene-IMY05_C4590000100 Carbamoyl-phosphate synthetase large chain, oligomerisation domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003008 system process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity MF
GO:0004587 ornithine-oxo-acid transaminase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006525 arginine metabolic process BP
GO:0006526 arginine biosynthetic process BP
GO:0006536 glutamate metabolic process BP
GO:0006538 glutamate catabolic process BP
GO:0006591 ornithine metabolic process BP
GO:0006592 ornithine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0007600 sensory perception BP
GO:0007601 visual perception BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008483 transaminase activity MF
GO:0008652 amino acid biosynthetic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009063 amino acid catabolic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009065 glutamine family amino acid catabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016053 organic acid biosynthetic process BP
GO:0016054 organic acid catabolic process BP
GO:0016740 transferase activity MF
GO:0016769 transferase activity, transferring nitrogenous groups MF
GO:0019752 carboxylic acid metabolic process BP
GO:0019842 vitamin binding MF
GO:0022607 cellular component assembly BP
GO:0030170 pyridoxal phosphate binding MF
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0034214 protein hexamerization BP
GO:0036094 small molecule binding MF
GO:0042450 arginine biosynthetic process via ornithine BP
GO:0042802 identical protein binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043436 oxoacid metabolic process BP
GO:0043648 dicarboxylic acid metabolic process BP
GO:0043649 dicarboxylic acid catabolic process BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050877 nervous system process BP
GO:0050953 sensory perception of light stimulus BP
GO:0051259 protein complex oligomerization BP
GO:0065003 protein-containing complex assembly BP
GO:0070013 intracellular organelle lumen CC
GO:0070279 vitamin B6 binding MF
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901606 alpha-amino acid catabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -