Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4482000100
View in Genome Browser
Position
JAEQKX010000693.1:22499-23578 (-)
1079bp
Gene Type
gene
Gene Description (Protein Product)
"Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP)
Organism
Salix suchowensis
Also AS AT4G13720

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4546000100 Thymidylate kinase
gene-IMY05_C4755000200 Dihydropteroate synthase
gene-IMY05_C4524000300 Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and dUMP as phosphate acceptors, but can also use CMP, dCMP and AMP

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004170 dUTP diphosphatase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008828 dATP diphosphatase activity MF
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009141 nucleoside triphosphate metabolic process BP
GO:0009143 nucleoside triphosphate catabolic process BP
GO:0009144 purine nucleoside triphosphate metabolic process BP
GO:0009146 purine nucleoside triphosphate catabolic process BP
GO:0009147 pyrimidine nucleoside triphosphate metabolic process BP
GO:0009149 pyrimidine nucleoside triphosphate catabolic process BP
GO:0009200 deoxyribonucleoside triphosphate metabolic process BP
GO:0009204 deoxyribonucleoside triphosphate catabolic process BP
GO:0009211 pyrimidine deoxyribonucleoside triphosphate metabolic process BP
GO:0009213 pyrimidine deoxyribonucleoside triphosphate catabolic process BP
GO:0009215 purine deoxyribonucleoside triphosphate metabolic process BP
GO:0009217 purine deoxyribonucleoside triphosphate catabolic process BP
GO:0009987 cellular process BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019439 aromatic compound catabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0033554 cellular response to stress BP
GO:0034404 nucleobase-containing small molecule biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0034655 nucleobase-containing compound catabolic process BP
GO:0035870 dITP diphosphatase activity MF
GO:0036217 dGTP diphosphatase activity MF
GO:0036218 dTTP diphosphatase activity MF
GO:0036219 GTP diphosphatase activity MF
GO:0036220 ITP diphosphatase activity MF
GO:0036221 UTP diphosphatase activity MF
GO:0036222 XTP diphosphatase activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046434 organophosphate catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0047429 nucleoside triphosphate diphosphatase activity MF
GO:0047840 dCTP diphosphatase activity MF
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:1901292 nucleoside phosphate catabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map03008 Ribosome biogenesis in eukaryotes Ribosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It requires hundreds of factors not present in the mature particle. In the absence of these proteins, ribosome biogenesis is stalled and cell growth is terminated even under optimal growth conditions. The primary pre-rRNA transcript is assembled into the 90S pre-ribosome, which contains both 40S and 60S assembly factors. Within this complex, the pre-rRNA is cleaved. pre-60S ribosomes are subjected to several sequential processing steps in the nucleoplasm involving numerous assembly intermediates before it is exported to the cytoplasm and matured into the 60S ribosomal subunit. The pre-40S ribosome is matured to the small ribosomal subunit in the cytoplasm by cleavage.
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00230 Purine metabolism -
map00230 Purine metabolism -