Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4640000200
View in Genome Browser
Position
JAEQKX010000833.1:9360-10268 (+)
908bp
Gene Type
gene
Gene Description (Protein Product)
GTP-binding protein
Organism
Salix suchowensis
Also AS AT5G59840

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4676000200 Belongs to the Rab GDI family
gene-IMY05_C4790000100 ARF-like small GTPases; ARF, ADP-ribosylation factor
gene-IMY05_C4881000400 Rab subfamily of small GTPases

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000131 incipient cellular bud site CC
GO:0000166 nucleotide binding MF
GO:0000910 cytokinesis BP
GO:0001411 hyphal tip CC
GO:0001882 nucleoside binding MF
GO:0001883 purine nucleoside binding MF
GO:0002790 peptide secretion BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003924 GTPase activity MF
GO:0005488 binding MF
GO:0005525 GTP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005628 prospore membrane CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005741 mitochondrial outer membrane CC
GO:0005768 endosome CC
GO:0005783 endoplasmic reticulum CC
GO:0005815 microtubule organizing center CC
GO:0005816 spindle pole body CC
GO:0005856 cytoskeleton CC
GO:0005886 plasma membrane CC
GO:0005933 cellular bud CC
GO:0005934 cellular bud tip CC
GO:0005935 cellular bud neck CC
GO:0005937 mating projection CC
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006887 exocytosis BP
GO:0006892 post-Golgi vesicle-mediated transport BP
GO:0006893 Golgi to plasma membrane transport BP
GO:0006903 vesicle targeting BP
GO:0006904 vesicle docking involved in exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007107 membrane addition at site of cytokinesis BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009306 protein secretion BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009987 cellular process BP
GO:0010927 cellular component assembly involved in morphogenesis BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015630 microtubule cytoskeleton CC
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0017157 regulation of exocytosis BP
GO:0019001 guanyl nucleotide binding MF
GO:0019867 outer membrane CC
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022406 membrane docking BP
GO:0022413 reproductive process in single-celled organism BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0023052 signaling BP
GO:0030133 transport vesicle CC
GO:0030154 cell differentiation BP
GO:0030427 site of polarized growth CC
GO:0030435 sporulation resulting in formation of a cellular spore BP
GO:0030437 ascospore formation BP
GO:0031090 organelle membrane CC
GO:0031321 ascospore-type prospore assembly BP
GO:0031410 cytoplasmic vesicle CC
GO:0031521 spitzenkorper CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031968 organelle outer membrane CC
GO:0031975 envelope CC
GO:0031982 vesicle CC
GO:0032502 developmental process BP
GO:0032505 reproduction of a single-celled organism BP
GO:0032506 cytokinetic process BP
GO:0032549 ribonucleoside binding MF
GO:0032550 purine ribonucleoside binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032561 guanyl ribonucleotide binding MF
GO:0032879 regulation of localization BP
GO:0032940 secretion by cell BP
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0034293 sexual sporulation BP
GO:0034613 protein localization BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0035974 meiotic spindle pole body CC
GO:0036094 small molecule binding MF
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042763 intracellular immature spore CC
GO:0042764 ascospore-type prospore CC
GO:0042886 amide transport BP
GO:0042995 cell projection CC
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043332 mating projection tip CC
GO:0043934 sporulation BP
GO:0043935 sexual sporulation resulting in formation of a cellular spore BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0045184 establishment of protein localization BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0048468 cell development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051046 regulation of secretion BP
GO:0051049 regulation of transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051286 cell tip CC
GO:0051301 cell division BP
GO:0051321 meiotic cell cycle BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051648 vesicle localization BP
GO:0051649 establishment of localization in cell BP
GO:0051650 establishment of vesicle localization BP
GO:0051656 establishment of organelle localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065007 biological regulation BP
GO:0070727 cellular macromolecule localization BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0072659 protein localization to plasma membrane BP
GO:0090174 organelle membrane fusion BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:0098876 vesicle-mediated transport to the plasma membrane BP
GO:0120025 plasma membrane bounded cell projection CC
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:0140029 exocytic process BP
GO:0140056 organelle localization by membrane tethering BP
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF
GO:1903046 meiotic cell cycle process BP
GO:1903530 regulation of secretion by cell BP
GO:1990778 protein localization to cell periphery BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.