PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_C4651000400 View in Genome Browser
Position	JAEQKX010000844.1:5476-7409 (-) 1933bp
Gene Type	gene
Gene Description (Protein Product)	"Enolase
Organism	Salix suchowensis
Also AS	AT1G74030

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4651001200 Adenosine kinase

gene-IMY05_C5252001300 Acetyl-coenzyme A carboxylase carboxyl transferase

gene-IMY05_C4821000600 Belongs to the isocitrate lyase PEP mutase superfamily. Isocitrate lyase family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000015	phosphopyruvate hydratase complex	CC
GO:0000322	storage vacuole	CC
GO:0000323	lytic vacuole	CC
GO:0000324	fungal-type vacuole	CC
GO:0003674	molecular_function	MF
GO:0003810	protein-glutamine gamma-glutamyltransferase activity	MF
GO:0003824	catalytic activity	MF
GO:0004634	phosphopyruvate hydratase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005576	extracellular region	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005773	vacuole	CC
GO:0005829	cytosol	CC
GO:0005886	plasma membrane	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006006	glucose metabolic process	BP
GO:0006007	glucose catabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006090	pyruvate metabolic process	BP
GO:0006091	generation of precursor metabolites and energy	BP
GO:0006094	gluconeogenesis	BP
GO:0006096	glycolytic process	BP
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006163	purine nucleotide metabolic process	BP
GO:0006164	purine nucleotide biosynthetic process	BP
GO:0006165	nucleoside diphosphate phosphorylation	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006733	obsolete oxidoreduction coenzyme metabolic process	BP
GO:0006734	NADH metabolic process	BP
GO:0006735	NADH regeneration	BP
GO:0006753	nucleoside phosphate metabolic process	BP
GO:0006754	ATP biosynthetic process	BP
GO:0006757	ATP generation from ADP	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009117	nucleotide metabolic process	BP
GO:0009123	nucleoside monophosphate metabolic process	BP
GO:0009124	nucleoside monophosphate biosynthetic process	BP
GO:0009126	purine nucleoside monophosphate metabolic process	BP
GO:0009127	purine nucleoside monophosphate biosynthetic process	BP
GO:0009132	nucleoside diphosphate metabolic process	BP
GO:0009135	purine nucleoside diphosphate metabolic process	BP
GO:0009141	nucleoside triphosphate metabolic process	BP
GO:0009142	nucleoside triphosphate biosynthetic process	BP
GO:0009144	purine nucleoside triphosphate metabolic process	BP
GO:0009145	purine nucleoside triphosphate biosynthetic process	BP
GO:0009150	purine ribonucleotide metabolic process	BP
GO:0009152	purine ribonucleotide biosynthetic process	BP
GO:0009156	ribonucleoside monophosphate biosynthetic process	BP
GO:0009161	ribonucleoside monophosphate metabolic process	BP
GO:0009165	nucleotide biosynthetic process	BP
GO:0009166	nucleotide catabolic process	BP
GO:0009167	purine ribonucleoside monophosphate metabolic process	BP
GO:0009168	purine ribonucleoside monophosphate biosynthetic process	BP
GO:0009179	purine ribonucleoside diphosphate metabolic process	BP
GO:0009185	ribonucleoside diphosphate metabolic process	BP
GO:0009199	ribonucleoside triphosphate metabolic process	BP
GO:0009201	ribonucleoside triphosphate biosynthetic process	BP
GO:0009205	purine ribonucleoside triphosphate metabolic process	BP
GO:0009206	purine ribonucleoside triphosphate biosynthetic process	BP
GO:0009259	ribonucleotide metabolic process	BP
GO:0009260	ribonucleotide biosynthetic process	BP
GO:0009277	fungal-type cell wall	CC
GO:0009435	NAD biosynthetic process	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009897	external side of plasma membrane	CC
GO:0009898	cytoplasmic side of plasma membrane	CC
GO:0009986	cell surface	CC
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0015976	carbon utilization	BP
GO:0016020	membrane	CC
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016052	carbohydrate catabolic process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016310	phosphorylation	BP
GO:0016740	transferase activity	MF
GO:0016746	acyltransferase activity	MF
GO:0016755	aminoacyltransferase activity	MF
GO:0016829	lyase activity	MF
GO:0016835	carbon-oxygen lyase activity	MF
GO:0016836	hydro-lyase activity	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0018130	heterocycle biosynthetic process	BP
GO:0019318	hexose metabolic process	BP
GO:0019319	hexose biosynthetic process	BP
GO:0019320	hexose catabolic process	BP
GO:0019359	nicotinamide nucleotide biosynthetic process	BP
GO:0019362	pyridine nucleotide metabolic process	BP
GO:0019363	pyridine nucleotide biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019439	aromatic compound catabolic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0019674	NAD metabolic process	BP
GO:0019693	ribose phosphate metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019863	IgE binding	MF
GO:0019865	immunoglobulin binding	MF
GO:0030193	regulation of blood coagulation	BP
GO:0030195	negative regulation of blood coagulation	BP
GO:0030312	external encapsulating structure	CC
GO:0030445	yeast-form cell wall	CC
GO:0030446	hyphal cell wall	CC
GO:0030447	filamentous growth	BP
GO:0030984	kininogen binding	MF
GO:0030985	high molecular weight kininogen binding	MF
GO:0031012	extracellular matrix	CC
GO:0031347	regulation of defense response	BP
GO:0031349	positive regulation of defense response	BP
GO:0032101	regulation of response to external stimulus	BP
GO:0032102	negative regulation of response to external stimulus	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0032889	regulation of vacuole fusion, non-autophagic	BP
GO:0032991	protein-containing complex	CC
GO:0033043	regulation of organelle organization	BP
GO:0033554	cellular response to stress	BP
GO:0033993	response to lipid	BP
GO:0034404	nucleobase-containing small molecule biosynthetic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0034654	nucleobase-containing compound biosynthetic process	BP
GO:0034655	nucleobase-containing compound catabolic process	BP
GO:0035821	modulation of process of another organism	BP
GO:0036180	filamentous growth of a population of unicellular organisms in response to biotic stimulus	BP
GO:0040007	growth	BP
GO:0042221	response to chemical	BP
GO:0042730	fibrinolysis	BP
GO:0042866	pyruvate biosynthetic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0044003	modulation by symbiont of host process	BP
GO:0044088	regulation of vacuole organization	BP
GO:0044182	filamentous growth of a population of unicellular organisms	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044270	cellular nitrogen compound catabolic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044403	biological process involved in symbiotic interaction	BP
GO:0044409	entry into host	BP
GO:0044416	induction by symbiont of host defense response	BP
GO:0044419	biological process involved in interspecies interaction between organisms	BP
GO:0044421	obsolete extracellular region part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044445	obsolete cytosolic part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0044877	protein-containing complex binding	MF
GO:0046031	ADP metabolic process	BP
GO:0046034	ATP metabolic process	BP
GO:0046364	monosaccharide biosynthetic process	BP
GO:0046365	monosaccharide catabolic process	BP
GO:0046390	ribose phosphate biosynthetic process	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046434	organophosphate catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046496	nicotinamide nucleotide metabolic process	BP
GO:0046677	response to antibiotic	BP
GO:0046700	heterocycle catabolic process	BP
GO:0046939	nucleotide phosphorylation	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0048585	negative regulation of response to stimulus	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050818	regulation of coagulation	BP
GO:0050819	negative regulation of coagulation	BP
GO:0050878	regulation of body fluid levels	BP
GO:0050896	response to stimulus	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051241	negative regulation of multicellular organismal process	BP
GO:0051701	biological process involved in interaction with host	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0051716	cellular response to stimulus	BP
GO:0051817	obsolete modulation of process of other organism involved in symbiotic interaction	BP
GO:0051828	entry into host	BP
GO:0052031	modulation by symbiont of host defense response	BP
GO:0052173	response to defenses of other organism	BP
GO:0052200	response to host defenses	BP
GO:0052251	induction by symbiont of host defense response	BP
GO:0052255	modulation by symbiont of host defense response	BP
GO:0052509	induction by symbiont of host defense response	BP
GO:0052510	induction by symbiont of host defense response	BP
GO:0055086	nucleobase-containing small molecule metabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0061041	regulation of wound healing	BP
GO:0061045	negative regulation of wound healing	BP
GO:0061615	glycolytic process through fructose-6-phosphate	BP
GO:0061620	glycolytic process through glucose-6-phosphate	BP
GO:0061621	canonical glycolysis	BP
GO:0061718	glucose catabolic process to pyruvate	BP
GO:0062039	biofilm matrix	CC
GO:0062040	fungal biofilm matrix	CC
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071214	cellular response to abiotic stimulus	BP
GO:0071236	cellular response to antibiotic	BP
GO:0071310	cellular response to organic substance	BP
GO:0071396	cellular response to lipid	BP
GO:0071470	cellular response to osmotic stress	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071704	organic substance metabolic process	BP
GO:0071852	fungal-type cell wall organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0072330	monocarboxylic acid biosynthetic process	BP
GO:0072521	purine-containing compound metabolic process	BP
GO:0072522	purine-containing compound biosynthetic process	BP
GO:0072524	pyridine-containing compound metabolic process	BP
GO:0072525	pyridine-containing compound biosynthetic process	BP
GO:0075136	response to host	BP
GO:0080134	regulation of response to stress	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097305	response to alcohol	BP
GO:0097306	cellular response to alcohol	BP
GO:0097307	response to farnesol	BP
GO:0097308	cellular response to farnesol	BP
GO:0098552	side of membrane	CC
GO:0098562	cytoplasmic side of membrane	CC
GO:0104004	cellular response to environmental stimulus	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1900046	regulation of hemostasis	BP
GO:1900047	negative regulation of hemostasis	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901292	nucleoside phosphate catabolic process	BP
GO:1901293	nucleoside phosphate biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1902494	catalytic complex	CC
GO:1903034	regulation of response to wounding	BP
GO:1903035	negative regulation of response to wounding	BP

KEGG Term	Name	Description
map03018	RNA degradation	The correct processing, quality control and turnover of cellular RNA molecules are critical to many aspects in the expression of genetic information. In eukaryotes, two major pathways of mRNA decay exist and both pathways are initiated by poly(A) shortening of the mRNA. In the 5' to 3' pathway, this is followed by decapping which then permits the 5' to 3' exonucleolytic degradation of transcripts. In the 3' to 5' pathway, the exosome, a large multisubunit complex, plays a key role. The exosome exists in archaeal cells, too. In bacteria, endoribonuclease E, a key enzyme involved in RNA decay and processing, organizes a protein complex called degradosome. RNase E or R interacts with the phosphate-dependent exoribonuclease polynucleotide phosphorylase, DEAD-box helicases, and additional factors in the RNA-degrading complex.
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00010	Glycolysis / Gluconeogenesis	Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which often corresponds to operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].