PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_C4687000300 View in Genome Browser
Position	JAEQKX010000878.1:13842-14933 (+) 1091bp
Gene Type	gene
Gene Description (Protein Product)	glycosyltransferase family 39 protein
Organism	Salix suchowensis
Also AS	AT2G25110

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4703000800 Mannosyltransferase (PIG-M)

gene-IMY05_C4761000100 Belongs to the glycosyl hydrolase 31 family

gene-IMY05_C5274000100 Calreticulin-3-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000030	mannosyltransferase activity	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004169	dolichyl-phosphate-mannose-protein mannosyltransferase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0005886	plasma membrane	CC
GO:0006464	protein modification process	BP
GO:0006486	protein glycosylation	BP
GO:0006493	protein O-linked glycosylation	BP
GO:0006508	proteolysis	BP
GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006886	intracellular protein transport	BP
GO:0006950	response to stress	BP
GO:0008104	protein localization	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009059	macromolecule biosynthetic process	BP
GO:0009100	glycoprotein metabolic process	BP
GO:0009101	glycoprotein biosynthetic process	BP
GO:0009268	response to pH	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009966	regulation of signal transduction	BP
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010243	response to organonitrogen compound	BP
GO:0010498	proteasomal protein catabolic process	BP
GO:0010646	regulation of cell communication	BP
GO:0012505	endomembrane system	CC
GO:0015031	protein transport	BP
GO:0015833	peptide transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016740	transferase activity	MF
GO:0016757	glycosyltransferase activity	MF
GO:0016758	hexosyltransferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0023051	regulation of signaling	BP
GO:0030163	protein catabolic process	BP
GO:0030447	filamentous growth	BP
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031501	mannosyltransferase complex	CC
GO:0031502	dolichyl-phosphate-mannose-protein mannosyltransferase complex	CC
GO:0031505	fungal-type cell wall organization	BP
GO:0031984	organelle subcompartment	CC
GO:0032527	protein exit from endoplasmic reticulum	BP
GO:0032991	protein-containing complex	CC
GO:0033036	macromolecule localization	BP
GO:0033554	cellular response to stress	BP
GO:0034613	protein localization	BP
GO:0034645	cellular macromolecule biosynthetic process	BP
GO:0034976	response to endoplasmic reticulum stress	BP
GO:0035268	protein mannosylation	BP
GO:0035269	protein O-linked mannosylation	BP
GO:0035690	cellular response to xenobiotic stimulus	BP
GO:0035966	response to topologically incorrect protein	BP
GO:0035967	cellular response to topologically incorrect protein	BP
GO:0036176	response to neutral pH	BP
GO:0036177	filamentous growth of a population of unicellular organisms in response to pH	BP
GO:0036178	filamentous growth of a population of unicellular organisms in response to neutral pH	BP
GO:0036211	protein modification process	BP
GO:0036503	ERAD pathway	BP
GO:0040007	growth	BP
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0042710	biofilm formation	BP
GO:0042886	amide transport	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043413	macromolecule glycosylation	BP
GO:0044010	single-species biofilm formation	BP
GO:0044011	single-species biofilm formation on inanimate substrate	BP
GO:0044182	filamentous growth of a population of unicellular organisms	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044257	protein catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044265	cellular macromolecule catabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0044764	obsolete multi-organism cellular process	BP
GO:0045184	establishment of protein localization	BP
GO:0045229	external encapsulating structure organization	BP
GO:0046907	intracellular transport	BP
GO:0048583	regulation of response to stimulus	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051603	proteolysis involved in protein catabolic process	BP
GO:0051641	cellular localization	BP
GO:0051649	establishment of localization in cell	BP
GO:0051703	biological process involved in intraspecies interaction between organisms	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051716	cellular response to stimulus	BP
GO:0051788	response to misfolded protein	BP
GO:0065007	biological regulation	BP
GO:0070085	glycosylation	BP
GO:0070727	cellular macromolecule localization	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071218	cellular response to misfolded protein	BP
GO:0071310	cellular response to organic substance	BP
GO:0071554	cell wall organization or biogenesis	BP
GO:0071555	cell wall organization	BP
GO:0071702	organic substance transport	BP
GO:0071704	organic substance metabolic process	BP
GO:0071705	nitrogen compound transport	BP
GO:0071712	ER-associated misfolded protein catabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071852	fungal-type cell wall organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0080134	regulation of response to stress	BP
GO:0080135	regulation of cellular response to stress	BP
GO:0090605	submerged biofilm formation	BP
GO:0090609	single-species submerged biofilm formation	BP
GO:0097502	mannosylation	BP
GO:0097582	dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt2p dimer complex	CC
GO:0097583	dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt3p dimer complex	CC
GO:0097584	dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt2p dimer complex	CC
GO:0097585	dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt3p dimer complex	CC
GO:0098796	membrane protein complex	CC
GO:0098827	endoplasmic reticulum subcompartment	CC
GO:1900101	regulation of endoplasmic reticulum unfolded protein response	BP
GO:1901135	carbohydrate derivative metabolic process	BP
GO:1901137	carbohydrate derivative biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901698	response to nitrogen compound	BP
GO:1902494	catalytic complex	CC
GO:1905897	regulation of response to endoplasmic reticulum stress	BP
GO:1990234	transferase complex	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00514	Other types of O-glycan biosynthesis	O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].