Basic Information
Gene ID
gene-IMY05_C4687000400
Position
JAEQKX010000878.1:16905-18287 (-)
1382bp
Gene Type
gene
Gene Description (Protein Product)
Cysteine proteinase
Organism
Also AS AT4G30890

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4762000100 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
gene-IMY05_C4920000400 Suppressor of forked protein (Suf)
gene-IMY05_C4923000200 In Between Ring fingers

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003729 mRNA binding MF
GO:0003824 catalytic activity MF
GO:0004843 cysteine-type deubiquitinase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006914 autophagy BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010494 cytoplasmic stress granule CC
GO:0010498 proteasomal protein catabolic process BP
GO:0016236 macroautophagy BP
GO:0016579 protein deubiquitination BP
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0019783 ubiquitin-like protein peptidase activity MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0030163 protein catabolic process BP
GO:0032386 regulation of intracellular transport BP
GO:0032879 regulation of localization BP
GO:0032991 protein-containing complex CC
GO:0033554 cellular response to stress BP
GO:0034517 ribophagy BP
GO:0035770 ribonucleoprotein granule CC
GO:0035966 response to topologically incorrect protein BP
GO:0035967 cellular response to topologically incorrect protein BP
GO:0035973 aggrephagy BP
GO:0036211 protein modification process BP
GO:0036459 cysteine-type deubiquitinase activity MF
GO:0036464 cytoplasmic ribonucleoprotein granule CC
GO:0042221 response to chemical BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0047484 regulation of response to osmotic stress BP
GO:0048583 regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051049 regulation of transport BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0051788 response to misfolded protein BP
GO:0060341 regulation of cellular localization BP
GO:0060627 regulation of vesicle-mediated transport BP
GO:0060628 regulation of ER to Golgi vesicle-mediated transport BP
GO:0061912 selective autophagy BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071218 cellular response to misfolded protein BP
GO:0071310 cellular response to organic substance BP
GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system BP
GO:0071704 organic substance metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0097159 organic cyclic compound binding MF
GO:0101005 deubiquitinase activity MF
GO:0140096 catalytic activity, acting on a protein MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1905538 polysome binding MF
GO:1990861 Ubp3-Bre5 deubiquitination complex CC
GO:1990904 ribonucleoprotein complex CC