Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4687000800
View in Genome Browser
Position
JAEQKX010000878.1:29415-30447 (+)
1032bp
Gene Type
gene
Gene Description (Protein Product)
Destroys radicals which are normally produced within the cells and which are toxic to biological systems
Organism
Salix suchowensis
Also AS AT3G10920

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C4846000200 C-terminal domain of 1-Cys peroxiredoxin
gene-IMY05_C5117000100 Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain
gene-IMY05_C4836000400 P-loop containing nucleoside triphosphate hydrolase protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0000303 response to superoxide BP
GO:0000305 response to oxygen radical BP
GO:0001300 obsolete chronological cell aging BP
GO:0001302 obsolete replicative cell aging BP
GO:0001306 obsolete age-dependent response to oxidative stress BP
GO:0001315 obsolete age-dependent response to reactive oxygen species BP
GO:0001320 obsolete age-dependent response to reactive oxygen species involved in chronological cell aging BP
GO:0001323 obsolete age-dependent general metabolic decline involved in chronological cell aging BP
GO:0001324 obsolete age-dependent response to oxidative stress involved in chronological cell aging BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004784 superoxide dismutase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0006801 superoxide metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0007568 aging BP
GO:0007569 obsolete cell aging BP
GO:0007571 obsolete age-dependent general metabolic decline BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0016209 antioxidant activity MF
GO:0016491 oxidoreductase activity MF
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor MF
GO:0019430 removal of superoxide radicals BP
GO:0030145 manganese ion binding MF
GO:0031974 membrane-enclosed lumen CC
GO:0032502 developmental process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0042221 response to chemical BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048869 cellular developmental process BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070013 intracellular organelle lumen CC
GO:0070887 cellular response to chemical stimulus BP
GO:0071450 cellular response to oxygen radical BP
GO:0071451 cellular response to superoxide BP
GO:0072353 obsolete cellular age-dependent response to reactive oxygen species BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0097237 cellular response to toxic substance BP
GO:0098754 detoxification BP
GO:0098869 cellular oxidant detoxification BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1990748 cellular detoxification BP
KEGG Term Name Description
map04146 Peroxisome Peroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ether lipids and free radical detoxification. The biogenesis of peroxisomes starts with the early peroxins PEX3, PEX16 and PEX19 and proceeds via several steps. The import of membrane proteins into peroxisomes needs PEX19 for recognition, targeting and insertion via docking at PEX3. Matrix proteins in the cytosol are recognized by peroxisomal targeting signals (PTS) and transported to the docking complex at the peroxisomal membrane. Peroxisomes' deficiencies lead to severe and often fatal inherited peroxisomal disorders (PD). PDs are usually classified in two groups. The first group is disorders of peroxisome biogenesis which include Zellweger syndrome, and the second group is single peroxisomal enzyme deficiencies.