Basic Information
Gene Structure
Domain
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4690000700
View in Genome Browser
Position
JAEQKX010000881.1:27616-29023 (-)
1407bp
Gene Type
gene
Gene Description (Protein Product)
"PhoX homologous domain
Organism
Salix suchowensis
Also AS

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description


Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000407 phagophore assembly site CC
GO:0000422 autophagy of mitochondrion BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005543 phospholipid binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005769 early endosome CC
GO:0005773 vacuole CC
GO:0005776 autophagosome CC
GO:0005829 cytosol CC
GO:0006605 protein targeting BP
GO:0006623 protein targeting to vacuole BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006897 endocytosis BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007034 vacuolar transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008289 lipid binding MF
GO:0009056 catabolic process BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016236 macroautophagy BP
GO:0016237 lysosomal microautophagy BP
GO:0016482 cytosolic transport BP
GO:0019898 extrinsic component of membrane CC
GO:0022411 cellular component disassembly BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032258 cytoplasm to vacuole transport by the Cvt pathway BP
GO:0032266 phosphatidylinositol-3-phosphate binding MF
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034498 early endosome to Golgi transport BP
GO:0034613 protein localization BP
GO:0034727 piecemeal microautophagy of the nucleus BP
GO:0035091 phosphatidylinositol binding MF
GO:0042147 retrograde transport, endosome to Golgi BP
GO:0042886 amide transport BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044804 autophagy of nucleus BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0061709 reticulophagy BP
GO:0061726 mitochondrion disassembly BP
GO:0061912 selective autophagy BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0061951 establishment of protein localization to plasma membrane BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072657 protein localization to membrane BP
GO:0072659 protein localization to plasma membrane BP
GO:0072665 protein localization to vacuole BP
GO:0072666 establishment of protein localization to vacuole BP
GO:0090150 establishment of protein localization to membrane BP
GO:0097708 intracellular vesicle CC
GO:0098657 import into cell BP
GO:0098876 vesicle-mediated transport to the plasma membrane BP
GO:0099638 endosome to plasma membrane protein transport BP
GO:1901981 phosphatidylinositol phosphate binding MF
GO:1903008 organelle disassembly BP
GO:1990126 endocytic recycling BP
GO:1990778 protein localization to cell periphery BP
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.