PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-IMY05_C4755000600 View in Genome Browser
Position	JAEQKX010000942.1:19813-21205 (-) 1392bp
Gene Type	gene
Gene Description (Protein Product)	STAG domain
Organism	Salix suchowensis
Also AS	AT2G47980

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-IMY05_C4903000200 Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases

gene-IMY05_C4903000300 Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases

gene-IMY05_C5088000500 Belongs to the RecA family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000070	mitotic sister chromatid segregation	BP
GO:0000228	nuclear chromosome	CC
GO:0000278	mitotic cell cycle	BP
GO:0000280	nuclear division	BP
GO:0000775	chromosome, centromeric region	CC
GO:0000785	chromatin	CC
GO:0000790	chromatin	CC
GO:0000792	heterochromatin	CC
GO:0000793	condensed chromosome	CC
GO:0000794	condensed nuclear chromosome	CC
GO:0000798	cohesin complex	CC
GO:0000819	sister chromatid segregation	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003682	chromatin binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0005720	heterochromatin	CC
GO:0005721	pericentric heterochromatin	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007059	chromosome segregation	BP
GO:0007062	sister chromatid cohesion	BP
GO:0007063	regulation of sister chromatid cohesion	BP
GO:0007064	mitotic sister chromatid cohesion	BP
GO:0007088	regulation of mitotic nuclear division	BP
GO:0007346	regulation of mitotic cell cycle	BP
GO:0008104	protein localization	BP
GO:0008150	biological_process	BP
GO:0008278	cohesin complex	CC
GO:0009987	cellular process	BP
GO:0010564	regulation of cell cycle process	BP
GO:0010638	positive regulation of organelle organization	BP
GO:0010639	negative regulation of organelle organization	BP
GO:0010948	negative regulation of cell cycle process	BP
GO:0016043	cellular component organization	BP
GO:0022402	cell cycle process	BP
GO:0030892	mitotic cohesin complex	CC
GO:0031618	pericentric heterochromatin	CC
GO:0031934	mating-type region heterochromatin	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032879	regulation of localization	BP
GO:0032880	regulation of protein localization	BP
GO:0032991	protein-containing complex	CC
GO:0033036	macromolecule localization	BP
GO:0033043	regulation of organelle organization	BP
GO:0033044	regulation of chromosome organization	BP
GO:0033045	regulation of sister chromatid segregation	BP
GO:0033046	negative regulation of sister chromatid segregation	BP
GO:0033047	regulation of mitotic sister chromatid segregation	BP
GO:0033365	protein localization to organelle	BP
GO:0034085	establishment of sister chromatid cohesion	BP
GO:0034087	establishment of mitotic sister chromatid cohesion	BP
GO:0034502	protein localization to chromosome	BP
GO:0034613	protein localization	BP
GO:0034990	mitotic cohesin complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043388	positive regulation of DNA binding	BP
GO:0043392	negative regulation of DNA binding	BP
GO:0044092	negative regulation of molecular function	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044454	obsolete nuclear chromosome part	CC
GO:0044464	obsolete cell part	CC
GO:0045786	negative regulation of cell cycle	BP
GO:0045787	positive regulation of cell cycle	BP
GO:0045840	positive regulation of mitotic nuclear division	BP
GO:0045875	negative regulation of sister chromatid cohesion	BP
GO:0045876	positive regulation of sister chromatid cohesion	BP
GO:0045931	positive regulation of mitotic cell cycle	BP
GO:0048285	organelle fission	BP
GO:0048518	positive regulation of biological process	BP
GO:0048519	negative regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0048523	negative regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051098	regulation of binding	BP
GO:0051099	positive regulation of binding	BP
GO:0051100	negative regulation of binding	BP
GO:0051101	regulation of DNA binding	BP
GO:0051128	regulation of cellular component organization	BP
GO:0051129	negative regulation of cellular component organization	BP
GO:0051130	positive regulation of cellular component organization	BP
GO:0051179	localization	BP
GO:0051276	chromosome organization	BP
GO:0051641	cellular localization	BP
GO:0051726	regulation of cell cycle	BP
GO:0051783	regulation of nuclear division	BP
GO:0051785	positive regulation of nuclear division	BP
GO:0051983	regulation of chromosome segregation	BP
GO:0051984	positive regulation of chromosome segregation	BP
GO:0051985	negative regulation of chromosome segregation	BP
GO:0060341	regulation of cellular localization	BP
GO:0061774	cohesin unloading	BP
GO:0061780	mitotic cohesin loading	BP
GO:0061781	mitotic cohesin unloading	BP
GO:0062033	positive regulation of mitotic sister chromatid segregation	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070727	cellular macromolecule localization	BP
GO:0071168	protein localization to chromatin	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071921	cohesin loading	BP
GO:0071922	regulation of cohesin loading	BP
GO:0090068	positive regulation of cell cycle process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0098687	chromosomal region	CC
GO:0098813	nuclear chromosome segregation	BP
GO:0140014	mitotic nuclear division	BP
GO:1901363	heterocyclic compound binding	MF
GO:1903047	mitotic cell cycle process	BP
GO:1903827	regulation of protein localization	BP
GO:1903829	positive regulation of protein localization	BP
GO:1905309	positive regulation of cohesin loading	BP
GO:1905405	regulation of mitotic cohesin loading	BP
GO:1905406	positive regulation of mitotic cohesin loading	BP
GO:1905634	regulation of protein localization to chromatin	BP
GO:1990421	chromosome, subtelomeric region	CC
GO:1990707	chromosome, subtelomeric region	CC
GO:2001251	negative regulation of chromosome organization	BP
GO:2001252	positive regulation of chromosome organization	BP