Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-IMY05_C4765000100
View in Genome Browser
Position
JAEQKX010000952.1:2595-3822 (+)
1227bp
Gene Type
gene
Gene Description (Protein Product)
ABC transporter transmembrane region
Organism
Salix suchowensis
Also AS AT5G39040

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-IMY05_C5274000100 Calreticulin-3-like
gene-IMY05_C5070000200 Protein disulfide isomerase-like
gene-IMY05_C5205000200 Transmembrane proteins 14C

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0006810 transport BP
GO:0006839 mitochondrial transport BP
GO:0006857 oligopeptide transport BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0015399 primary active transmembrane transporter activity MF
GO:0015405 ATPase-coupled transmembrane transporter activity MF
GO:0015421 ABC-type oligopeptide transporter activity MF
GO:0015440 ABC-type peptide transporter activity MF
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0019866 organelle inner membrane CC
GO:0022804 active transmembrane transporter activity MF
GO:0022857 transmembrane transporter activity MF
GO:0031090 organelle membrane CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0033220 obsolete ATPase-coupled amide-transporter activity MF
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0035672 oligopeptide transmembrane transport BP
GO:0035673 oligopeptide transmembrane transporter activity MF
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0042623 ATP hydrolysis activity MF
GO:0042626 ATPase-coupled transmembrane transporter activity MF
GO:0042886 amide transport BP
GO:0042887 amide transmembrane transporter activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043492 ATPase-coupled transmembrane transporter activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0070301 cellular response to hydrogen peroxide BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071236 cellular response to antibiotic BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0090374 oligopeptide export from mitochondrion BP
GO:0097237 cellular response to toxic substance BP
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
GO:1904680 peptide transmembrane transporter activity MF
GO:1990542 mitochondrial transmembrane transport BP
KEGG Term Name Description
map02010 ABC transporters The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00230 Purine metabolism -