Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_001001.g
View in Genome Browser
Position
Scaffold_195192:440542554-440605661 (-)
63107bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peptidase C19 family
Organism
Sequoia sempervirens
Also AS AT5G06600

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_002305.g Protein DAMAGED DNA-BINDING
SESE_006866.g Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes
SESE_030556.g Peroxisome biogenesis protein
Regulatory gene
SESE_001495.g B3 domain-containing protein
SESE_002563.g reveille
SESE_003268.g Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000122 negative regulation of transcription by RNA polymerase II BP
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0001654 eye development BP
GO:0001700 embryonic development via the syncytial blastoderm BP
GO:0001701 in utero embryonic development BP
GO:0001745 compound eye morphogenesis BP
GO:0001764 neuron migration BP
GO:0002682 regulation of immune system process BP
GO:0003002 regionalization BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0004843 cysteine-type deubiquitinase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006605 protein targeting BP
GO:0006625 protein targeting to peroxisome BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006897 endocytosis BP
GO:0006928 obsolete movement of cell or subcellular component BP
GO:0006996 organelle organization BP
GO:0007031 peroxisome organization BP
GO:0007097 nuclear migration BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007166 cell surface receptor signaling pathway BP
GO:0007167 enzyme-linked receptor protein signaling pathway BP
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway BP
GO:0007179 transforming growth factor beta receptor signaling pathway BP
GO:0007275 multicellular organism development BP
GO:0007276 gamete generation BP
GO:0007292 female gamete generation BP
GO:0007349 cellularization BP
GO:0007389 pattern specification process BP
GO:0007399 nervous system development BP
GO:0007409 axonogenesis BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0007423 sensory organ development BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0008354 germ cell migration BP
GO:0008583 mystery cell differentiation BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009792 embryo development ending in birth or egg hatching BP
GO:0009798 axis specification BP
GO:0009887 animal organ morphogenesis BP
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009950 dorsal/ventral axis specification BP
GO:0009953 dorsal/ventral pattern formation BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010558 negative regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0016192 vesicle-mediated transport BP
GO:0016477 cell migration BP
GO:0016579 protein deubiquitination BP
GO:0016787 hydrolase activity MF
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019783 ubiquitin-like protein peptidase activity MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0019953 sexual reproduction BP
GO:0021537 telencephalon development BP
GO:0021543 pallium development BP
GO:0021549 cerebellum development BP
GO:0021575 hindbrain morphogenesis BP
GO:0021587 cerebellum morphogenesis BP
GO:0021695 cerebellar cortex development BP
GO:0021696 cerebellar cortex morphogenesis BP
GO:0021698 cerebellar cortex structural organization BP
GO:0021761 limbic system development BP
GO:0021766 hippocampus development BP
GO:0022008 neurogenesis BP
GO:0022037 metencephalon development BP
GO:0022412 cellular process involved in reproduction in multicellular organism BP
GO:0022414 reproductive process BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0030030 cell projection organization BP
GO:0030154 cell differentiation BP
GO:0030162 regulation of proteolysis BP
GO:0030163 protein catabolic process BP
GO:0030182 neuron differentiation BP
GO:0030424 axon CC
GO:0030426 growth cone CC
GO:0030427 site of polarized growth CC
GO:0030509 BMP signaling pathway BP
GO:0030900 forebrain development BP
GO:0030902 hindbrain development BP
GO:0031175 neuron projection development BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031327 negative regulation of cellular biosynthetic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032504 multicellular organism reproduction BP
GO:0032989 cellular component morphogenesis BP
GO:0032990 cell part morphogenesis BP
GO:0033036 macromolecule localization BP
GO:0033267 obsolete axon part CC
GO:0033365 protein localization to organelle BP
GO:0034613 protein localization BP
GO:0035190 syncytial nuclear migration BP
GO:0035192 nuclear cortical migration BP
GO:0036211 protein modification process BP
GO:0036459 cysteine-type deubiquitinase activity MF
GO:0040007 growth BP
GO:0040011 locomotion BP
GO:0042221 response to chemical BP
GO:0042886 amide transport BP
GO:0042995 cell projection CC
GO:0043005 neuron projection CC
GO:0043009 chordate embryonic development BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043574 peroxisomal transport BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044463 obsolete cell projection part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0045177 apical part of cell CC
GO:0045184 establishment of protein localization BP
GO:0045861 negative regulation of proteolysis BP
GO:0045892 negative regulation of DNA-templated transcription BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0045935 positive regulation of nucleobase-containing compound metabolic process BP
GO:0046332 SMAD binding MF
GO:0046907 intracellular transport BP
GO:0048468 cell development BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048532 anatomical structure arrangement BP
GO:0048583 regulation of response to stimulus BP
GO:0048588 developmental cell growth BP
GO:0048589 developmental growth BP
GO:0048592 eye morphogenesis BP
GO:0048609 multicellular organismal reproductive process BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048666 neuron development BP
GO:0048667 cell morphogenesis involved in neuron differentiation BP
GO:0048675 axon extension BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048749 compound eye development BP
GO:0048812 neuron projection morphogenesis BP
GO:0048856 anatomical structure development BP
GO:0048858 cell projection morphogenesis BP
GO:0048869 cellular developmental process BP
GO:0048870 cell motility BP
GO:0050776 regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050854 regulation of antigen receptor-mediated signaling pathway BP
GO:0050856 regulation of T cell receptor signaling pathway BP
GO:0050896 response to stimulus BP
GO:0051052 regulation of DNA metabolic process BP
GO:0051054 positive regulation of DNA metabolic process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051246 regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051253 negative regulation of RNA metabolic process BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051647 nucleus localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0051674 localization of cell BP
GO:0051704 obsolete multi-organism process BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060322 head development BP
GO:0060560 developmental growth involved in morphogenesis BP
GO:0061564 axon development BP
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0070013 intracellular organelle lumen CC
GO:0070410 co-SMAD binding MF
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070727 cellular macromolecule localization BP
GO:0070848 response to growth factor BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071108 protein K48-linked deubiquitination BP
GO:0071310 cellular response to organic substance BP
GO:0071363 cellular response to growth factor stimulus BP
GO:0071495 cellular response to endogenous stimulus BP
GO:0071559 response to transforming growth factor beta BP
GO:0071560 cellular response to transforming growth factor beta stimulus BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071772 response to BMP BP
GO:0071773 cellular response to BMP stimulus BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:0072662 protein localization to peroxisome BP
GO:0072663 establishment of protein localization to peroxisome BP
GO:0080090 regulation of primary metabolic process BP
GO:0090596 sensory organ morphogenesis BP
GO:0097458 obsolete neuron part CC
GO:0098657 import into cell BP
GO:0101005 deubiquitinase activity MF
GO:0120025 plasma membrane bounded cell projection CC
GO:0120036 plasma membrane bounded cell projection organization BP
GO:0120038 obsolete plasma membrane bounded cell projection part CC
GO:0120039 plasma membrane bounded cell projection morphogenesis BP
GO:0140096 catalytic activity, acting on a protein MF
GO:0150034 distal axon CC
GO:1901535 regulation of DNA demethylation BP
GO:1901537 positive regulation of DNA demethylation BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1902679 negative regulation of RNA biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903507 negative regulation of nucleic acid-templated transcription BP
GO:1990138 neuron projection extension BP
GO:1990380 K48-linked deubiquitinase activity MF
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000113 negative regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP