Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
SESE_032290.g
View in Genome Browser
Position
Scaffold_344217:1032850858-1032923122 (-)
72264bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
Organism
Sequoia sempervirens
Also AS AT1G68010

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
SESE_038036.g Belongs to the isocitrate lyase PEP mutase superfamily. Isocitrate lyase family
SESE_065956.g Belongs to the isocitrate lyase PEP mutase superfamily. Isocitrate lyase family
SESE_073970.g (S)-2-hydroxy-acid oxidase
Regulatory gene
SESE_002563.g reveille
SESE_003268.g Transcription factor
SESE_003364.g isoform X1

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003727 single-stranded RNA binding MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005777 peroxisome CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008187 poly-pyrimidine tract binding MF
GO:0008266 poly(U) RNA binding MF
GO:0008465 glycerate dehydrogenase activity MF
GO:0009314 response to radiation BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009416 response to light stimulus BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009605 response to external stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009853 photorespiration BP
GO:0009854 oxidative photosynthetic carbon pathway BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010035 response to inorganic substance BP
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MF
GO:0016618 hydroxypyruvate reductase activity MF
GO:0030267 glyoxylate reductase (NADP+) activity MF
GO:0031668 cellular response to extracellular stimulus BP
GO:0033554 cellular response to stress BP
GO:0042221 response to chemical BP
GO:0042579 microbody CC
GO:0042631 cellular response to water deprivation BP
GO:0043094 cellular metabolic compound salvage BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048046 apoplast CC
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071229 cellular response to acid chemical BP
GO:0071462 cellular response to water stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071496 cellular response to external stimulus BP
GO:0097159 organic cyclic compound binding MF
GO:0104004 cellular response to environmental stimulus BP
GO:1901363 heterocyclic compound binding MF
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00630 Glyoxylate and dicarboxylate metabolism -
map00260 Glycine, serine and threonine metabolism Serine is derived from 3-phospho-D-glycerate, an intermediate of glycolysis [MD:M00020], and glycine is derived from serine. Threonine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, threonine is derived from aspartate [MD:M00018].